Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BCKDHAP12694 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
BCKDHAP12694 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
BCKDHAP12694 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BCKDHAP12694 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.02□□□□□ -0.16
BCKDHAP12694 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BCKDHAP12694 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BCKDHAP12694 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
BCKDHAP12694 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
BCKDHAP12694 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.02□□□□□ -0.16
BCKDHAP12694 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BCKDHAP12694 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
BCKDHAP12694 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
BCKDHAP12694 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.02□□□□□ -0.17
BCKDHAP12694 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
BCKDHAP12694 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.02□□□□□ -0.17
BCKDHAP12694 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.02□□□□□ -0.17
BCKDHAP12694 AC132938.4-201ENST00000623835 848 ntBASIC14.02□□□□□ -0.17
BCKDHAP12694 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.02□□□□□ -0.17
BCKDHAP12694 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.02□□□□□ -0.17
BCKDHAP12694 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.02□□□□□ -0.17
BCKDHAP12694 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
BCKDHAP12694 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.02□□□□□ -0.17
BCKDHAP12694 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 AC023794.5-201ENST00000564380 2157 ntBASIC14.02□□□□□ -0.17
BCKDHAP12694 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.02□□□□□ -0.17
BCKDHAP12694 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.02□□□□□ -0.17
BCKDHAP12694 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
BCKDHAP12694 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
BCKDHAP12694 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
BCKDHAP12694 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.01□□□□□ -0.17
BCKDHAP12694 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.01□□□□□ -0.17
BCKDHAP12694 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
BCKDHAP12694 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
BCKDHAP12694 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BCKDHAP12694 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.01□□□□□ -0.17
BCKDHAP12694 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
BCKDHAP12694 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 KRT8P28-201ENST00000433288 1390 ntBASIC14.01□□□□□ -0.17
BCKDHAP12694 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.01□□□□□ -0.17
BCKDHAP12694 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
BCKDHAP12694 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.01□□□□□ -0.17
BCKDHAP12694 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BCKDHAP12694 ARSEP1-201ENST00000420443 635 ntBASIC14.01□□□□□ -0.17
BCKDHAP12694 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 TERF1P3-201ENST00000505638 1227 ntBASIC14.01□□□□□ -0.17
BCKDHAP12694 AP001889.1-201ENST00000525414 633 ntBASIC14.01□□□□□ -0.17
BCKDHAP12694 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.01□□□□□ -0.17
BCKDHAP12694 AC025279.2-201ENST00000569730 653 ntBASIC14.01□□□□□ -0.17
BCKDHAP12694 GNRHR2-203ENST00000581100 1187 ntBASIC14.01□□□□□ -0.17
BCKDHAP12694 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.01□□□□□ -0.17
BCKDHAP12694 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
BCKDHAP12694 ECM1P1-201ENST00000604092 1279 ntBASIC14.01□□□□□ -0.17
BCKDHAP12694 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.01□□□□□ -0.17
BCKDHAP12694 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BCKDHAP12694 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
BCKDHAP12694 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms