Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
RNF40O75150 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF40O75150 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RNF40O75150 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RNF40O75150 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF40O75150 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RNF40O75150 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF40O75150 BCYRN1-201ENST00000418539 200 ntBASIC15.96■□□□□ 0.15
RNF40O75150 AL691447.1-201ENST00000419456 387 ntBASIC15.96■□□□□ 0.15
RNF40O75150 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF40O75150 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF40O75150 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF40O75150 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF40O75150 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF40O75150 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF40O75150 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF40O75150 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF40O75150 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF40O75150 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF40O75150 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF40O75150 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF40O75150 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF40O75150 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF40O75150 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF40O75150 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
RNF40O75150 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RNF40O75150 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.96■□□□□ 0.14
RNF40O75150 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.96■□□□□ 0.14
RNF40O75150 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF40O75150 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF40O75150 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF40O75150 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF40O75150 AL121723.1-201ENST00000445194 1519 ntBASIC15.95■□□□□ 0.14
RNF40O75150 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF40O75150 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF40O75150 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF40O75150 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
RNF40O75150 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 AL035696.2-201ENST00000407941 709 ntBASIC15.95■□□□□ 0.14
RNF40O75150 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF40O75150 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF40O75150 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF40O75150 PFN1P12-201ENST00000455938 534 ntBASIC15.95■□□□□ 0.14
RNF40O75150 KRT18P43-201ENST00000469825 1281 ntBASIC15.95■□□□□ 0.14
RNF40O75150 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF40O75150 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF40O75150 AC079316.1-201ENST00000548397 411 ntBASIC15.95■□□□□ 0.14
RNF40O75150 KRT90P-201ENST00000549264 1064 ntBASIC15.95■□□□□ 0.14
RNF40O75150 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF40O75150 RN7SL440P-201ENST00000577855 343 ntBASIC15.95■□□□□ 0.14
RNF40O75150 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF40O75150 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF40O75150 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF40O75150 AC009542.2-202ENST00000619004 1067 ntBASIC15.95■□□□□ 0.14
RNF40O75150 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RNF40O75150 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF40O75150 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 AC023090.2-201ENST00000625182 2110 ntBASIC15.95■□□□□ 0.14
RNF40O75150 AL607033.1-201ENST00000623900 1599 ntBASIC15.95■□□□□ 0.14
RNF40O75150 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RNF40O75150 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF40O75150 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF40O75150 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF40O75150 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF40O75150 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms