Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRAMEF11O60813 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRAMEF11O60813 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRAMEF11O60813 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRAMEF11O60813 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
PRAMEF11O60813 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.79□□□□□ -0.04
PRAMEF11O60813 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 AHCYP4-201ENST00000419201 1315 ntBASIC14.79□□□□□ -0.04
PRAMEF11O60813 AC078875.1-201ENST00000431907 724 ntBASIC14.79□□□□□ -0.04
PRAMEF11O60813 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 AC091804.1-201ENST00000486888 567 ntBASIC14.79□□□□□ -0.04
PRAMEF11O60813 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 AC009779.1-201ENST00000551138 283 ntBASIC14.79□□□□□ -0.04
PRAMEF11O60813 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 AL132994.2-201ENST00000603120 687 ntBASIC14.79□□□□□ -0.04
PRAMEF11O60813 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 AC026748.1-201ENST00000624349 3251 ntBASIC14.79□□□□□ -0.04
PRAMEF11O60813 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRAMEF11O60813 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PRAMEF11O60813 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 HSPA7-201ENST00000445535 1927 ntBASIC14.78□□□□□ -0.04
PRAMEF11O60813 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.78□□□□□ -0.04
PRAMEF11O60813 AC018629.1-201ENST00000623381 1736 ntBASIC14.78□□□□□ -0.04
PRAMEF11O60813 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
PRAMEF11O60813 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PRAMEF11O60813 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 OR2I1P-209ENST00000641730 5365 ntBASIC14.78□□□□□ -0.04
PRAMEF11O60813 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.78□□□□□ -0.04
PRAMEF11O60813 XBP1P1-201ENST00000436573 652 ntBASIC14.78□□□□□ -0.04
PRAMEF11O60813 OR2R1P-201ENST00000441404 914 ntBASIC14.78□□□□□ -0.04
PRAMEF11O60813 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.78□□□□□ -0.04
PRAMEF11O60813 MARK2P5-201ENST00000507649 634 ntBASIC14.78□□□□□ -0.04
PRAMEF11O60813 PGAM1P5-201ENST00000548011 764 ntBASIC14.78□□□□□ -0.04
PRAMEF11O60813 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PRAMEF11O60813 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.78□□□□□ -0.04
PRAMEF11O60813 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.78□□□□□ -0.04
PRAMEF11O60813 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.78□□□□□ -0.04
PRAMEF11O60813 HSPA8P5-201ENST00000456928 2069 ntBASIC14.78□□□□□ -0.04
PRAMEF11O60813 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRAMEF11O60813 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PRAMEF11O60813 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRAMEF11O60813 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PRAMEF11O60813 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRAMEF11O60813 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRAMEF11O60813 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PRAMEF11O60813 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRAMEF11O60813 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRAMEF11O60813 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRAMEF11O60813 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.77□□□□□ -0.04
PRAMEF11O60813 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.77□□□□□ -0.04
PRAMEF11O60813 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.77□□□□□ -0.04
PRAMEF11O60813 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PRAMEF11O60813 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRAMEF11O60813 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.77□□□□□ -0.05
PRAMEF11O60813 MIR1247-201ENST00000408206 136 ntBASIC14.77□□□□□ -0.05
PRAMEF11O60813 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.77□□□□□ -0.05
PRAMEF11O60813 AC022217.1-201ENST00000521069 738 ntBASIC14.77□□□□□ -0.05
PRAMEF11O60813 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.77□□□□□ -0.05
PRAMEF11O60813 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.77□□□□□ -0.05
PRAMEF11O60813 MIR4525-201ENST00000580000 75 ntBASIC14.77□□□□□ -0.05
PRAMEF11O60813 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.77□□□□□ -0.05
PRAMEF11O60813 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.77□□□□□ -0.05
PRAMEF11O60813 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.77□□□□□ -0.05
PRAMEF11O60813 AC021016.3-201ENST00000608367 477 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms