Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 MTDHP5-201ENST00000598980 586 ntBASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 AL136172.1-201ENST00000598590 1394 ntBASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 FP325330.2-201ENST00000624219 5630 ntBASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CLK3P2-201ENST00000427566 1453 ntBASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 AC004832.2-201ENST00000426397 482 ntBASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms