Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 MIR193BHG-211ENST00000641433 5365 ntBASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 KRT8P35-201ENST00000483942 1338 ntBASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV18A0A075B6X5 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 AC083964.2-201ENST00000623988 2396 ntBASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 DRD5P1-201ENST00000456605 1438 ntBASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 PGAM5P1-201ENST00000518923 814 ntBASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 AC044860.1-202ENST00000559481 777 ntBASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms