Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 AC009093.10-201ENST00000641956 1442 ntBASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 BX640514.1-201ENST00000583223 1918 ntBASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 AC005962.1-201ENST00000584100 773 ntBASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 AC015802.1-201ENST00000588104 1449 ntBASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 AC007191.1-201ENST00000623179 2995 ntBASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGC4Q9Y5F7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 AC117489.1-201ENST00000625169 3217 ntBASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 FAM58BP-201ENST00000439056 645 ntBASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 AC012441.2-201ENST00000444843 739 ntBASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 TUBB8P8-201ENST00000458717 1058 ntBASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 AC009884.2-201ENST00000603110 324 ntBASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 AC022748.3-201ENST00000621828 275 ntBASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 AC011498.7-201ENST00000624986 2027 ntBASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 MBLAC2-202ENST00000514906 1936 ntBASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms