Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 C8orf49-201ENST00000525043 1968 ntBASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 PDIA3P2-201ENST00000428073 158 ntBASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 AC073150.1-201ENST00000450406 1084 ntBASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 AC008723.1-201ENST00000506922 207 ntBASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 AL157813.1-201ENST00000612996 587 ntBASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 AC009093.10-201ENST00000641956 1442 ntBASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 AC091951.1-201ENST00000512854 2465 ntBASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 AP002414.2-201ENST00000591780 3365 ntBASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 FRMPD2B-201ENST00000431305 1347 ntBASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTDP1Q9Y5B0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 AC116345.2-201ENST00000512837 523 ntBASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 AC103988.2-201ENST00000561804 725 ntBASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 AC092299.1-201ENST00000632679 757 ntBASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC16.91■□□□□ 0.3
CTDP1Q9Y5B0 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 TBC1D3J-201ENST00000620719 1426 ntBASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms