Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 MIR193BHG-211ENST00000641433 5365 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 KRT17P7-201ENST00000451704 1104 ntBASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 GCOM2-201ENST00000509133 1104 ntBASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 MBLAC2-202ENST00000514906 1936 ntBASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 AC011474.4-201ENST00000623523 2076 ntBASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM54Q9BYV2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 AC011840.2-201ENST00000563063 1520 ntBASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 AP005018.1-201ENST00000525475 301 ntBASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 AC132938.2-201ENST00000579188 680 ntBASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 AC008735.3-201ENST00000596646 500 ntBASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM54Q9BYV2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms