Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 Z97205.2-201ENST00000564697 1639 ntBASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AGGF1P1-201ENST00000509500 2073 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 LILRP1-201ENST00000444199 1370 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AL450487.1-201ENST00000426799 995 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AL592309.1-201ENST00000443127 649 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 MTND2P25-201ENST00000449028 610 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 KRT18P3-201ENST00000451602 1288 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 RPL12P24-201ENST00000474907 486 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AC253576.1-201ENST00000511645 1156 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AC090953.1-201ENST00000604305 1092 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AL133215.2-201ENST00000609242 977 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 AC018529.1-201ENST00000613063 361 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 FAM197Y3-203ENST00000618346 717 ntBASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SSBP4Q9BWG4 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 REXO1L1P-201ENST00000379010 6598 ntBASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SSBP4Q9BWG4 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms