Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.47□□□□□ -0.57
TRGV9Q99603 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV9Q99603 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV9Q99603 AC009486.1-201ENST00000569860 813 ntBASIC11.47□□□□□ -0.57
TRGV9Q99603 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.47□□□□□ -0.57
TRGV9Q99603 CLUHP6-201ENST00000580789 941 ntBASIC11.47□□□□□ -0.57
TRGV9Q99603 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 AC023511.2-201ENST00000618803 211 ntBASIC11.47□□□□□ -0.57
TRGV9Q99603 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.47□□□□□ -0.57
TRGV9Q99603 AC092053.3-201ENST00000641308 4975 ntBASIC11.47□□□□□ -0.57
TRGV9Q99603 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV9Q99603 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV9Q99603 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV9Q99603 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV9Q99603 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV9Q99603 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV9Q99603 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV9Q99603 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TRGV9Q99603 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TRGV9Q99603 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV9Q99603 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV9Q99603 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV9Q99603 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV9Q99603 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
TRGV9Q99603 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV9Q99603 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV9Q99603 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV9Q99603 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV9Q99603 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV9Q99603 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 AC004945.1-201ENST00000416738 983 ntBASIC11.46□□□□□ -0.57
TRGV9Q99603 AC098850.1-201ENST00000419919 790 ntBASIC11.46□□□□□ -0.57
TRGV9Q99603 SPTLC1P1-201ENST00000447199 261 ntBASIC11.46□□□□□ -0.57
TRGV9Q99603 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
TRGV9Q99603 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV9Q99603 FTLP10-202ENST00000505798 471 ntBASIC11.46□□□□□ -0.57
TRGV9Q99603 RNA5SP421-201ENST00000516864 134 ntBASIC11.46□□□□□ -0.57
TRGV9Q99603 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV9Q99603 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV9Q99603 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.46□□□□□ -0.57
TRGV9Q99603 AC138466.3-201ENST00000619983 221 ntBASIC11.46□□□□□ -0.57
TRGV9Q99603 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV9Q99603 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TRGV9Q99603 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
TRGV9Q99603 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV9Q99603 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV9Q99603 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.46□□□□□ -0.58
TRGV9Q99603 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.46□□□□□ -0.58
TRGV9Q99603 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV9Q99603 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV9Q99603 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV9Q99603 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV9Q99603 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
TRGV9Q99603 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms