Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 OR52M2P-201ENST00000414298 959 ntBASIC14.37□□□□□ -0.11
CLDN23Q96B33 PSAT1P2-201ENST00000426107 972 ntBASIC14.37□□□□□ -0.11
CLDN23Q96B33 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 RPL3P5-201ENST00000441645 1232 ntBASIC14.37□□□□□ -0.11
CLDN23Q96B33 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 AC023906.1-201ENST00000486386 453 ntBASIC14.36□□□□□ -0.11
CLDN23Q96B33 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 KRT18P37-201ENST00000520711 1282 ntBASIC14.36□□□□□ -0.11
CLDN23Q96B33 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 ACE3P-201ENST00000423435 1973 ntBASIC14.36□□□□□ -0.11
CLDN23Q96B33 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN23Q96B33 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN23Q96B33 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN23Q96B33 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN23Q96B33 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN23Q96B33 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms