Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 AC092658.1-201ENST00000505836 891 ntBASIC18.94■□□□□ 0.62
CCDC27Q2M243 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 AL136295.7-201ENST00000619226 1200 ntBASIC18.94■□□□□ 0.62
CCDC27Q2M243 AL591471.1-201ENST00000621855 229 ntBASIC18.94■□□□□ 0.62
CCDC27Q2M243 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC27Q2M243 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC27Q2M243 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 AC090643.2-201ENST00000623442 2029 ntBASIC18.93■□□□□ 0.62
CCDC27Q2M243 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 AC007274.1-201ENST00000439805 662 ntBASIC18.93■□□□□ 0.62
CCDC27Q2M243 AC106794.1-201ENST00000506935 792 ntBASIC18.93■□□□□ 0.62
CCDC27Q2M243 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 AL118558.3-201ENST00000607414 1079 ntBASIC18.93■□□□□ 0.62
CCDC27Q2M243 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC27Q2M243 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC27Q2M243 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 SNX18-202ENST00000343017 3140 ntBASIC18.92■□□□□ 0.62
CCDC27Q2M243 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 AC092580.1-201ENST00000433998 658 ntBASIC18.92■□□□□ 0.62
CCDC27Q2M243 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC27Q2M243 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 AC091804.1-201ENST00000486888 567 ntBASIC18.92■□□□□ 0.62
CCDC27Q2M243 AC005740.2-201ENST00000511085 419 ntBASIC18.92■□□□□ 0.62
CCDC27Q2M243 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC27Q2M243 MIR4538-201ENST00000581377 78 ntBASIC18.92■□□□□ 0.62
CCDC27Q2M243 AL022328.3-201ENST00000607943 679 ntBASIC18.92■□□□□ 0.62
CCDC27Q2M243 AC092299.1-201ENST00000632679 757 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms