Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.25□□□□□ -0.29
CDK5Q00535 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.25□□□□□ -0.29
CDK5Q00535 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CDK5Q00535 AC093726.1-201ENST00000608064 963 ntBASIC13.25□□□□□ -0.29
CDK5Q00535 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.25□□□□□ -0.29
CDK5Q00535 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.25□□□□□ -0.29
CDK5Q00535 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDK5Q00535 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDK5Q00535 NUTM2HP-201ENST00000442076 2498 ntBASIC13.25□□□□□ -0.29
CDK5Q00535 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.25□□□□□ -0.29
CDK5Q00535 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.25□□□□□ -0.29
CDK5Q00535 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDK5Q00535 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDK5Q00535 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CDK5Q00535 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CDK5Q00535 AL022313.4-201ENST00000562756 2046 ntBASIC13.25□□□□□ -0.29
CDK5Q00535 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDK5Q00535 AC138969.2-201ENST00000532739 9932 ntBASIC13.25□□□□□ -0.29
CDK5Q00535 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDK5Q00535 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CDK5Q00535 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDK5Q00535 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CDK5Q00535 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CDK5Q00535 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDK5Q00535 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CDK5Q00535 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CDK5Q00535 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.24□□□□□ -0.29
CDK5Q00535 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.24□□□□□ -0.29
CDK5Q00535 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CDK5Q00535 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.24□□□□□ -0.29
CDK5Q00535 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CDK5Q00535 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.24□□□□□ -0.29
CDK5Q00535 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.24□□□□□ -0.29
CDK5Q00535 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDK5Q00535 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.24□□□□□ -0.29
CDK5Q00535 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 AL512638.1-201ENST00000457493 794 ntBASIC13.24□□□□□ -0.29
CDK5Q00535 KRT18P25-201ENST00000508931 1278 ntBASIC13.24□□□□□ -0.29
CDK5Q00535 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.24□□□□□ -0.29
CDK5Q00535 ENPP7P5-201ENST00000541031 1031 ntBASIC13.24□□□□□ -0.29
CDK5Q00535 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.24□□□□□ -0.29
CDK5Q00535 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.24□□□□□ -0.29
CDK5Q00535 AC133539.2-201ENST00000604757 467 ntBASIC13.24□□□□□ -0.29
CDK5Q00535 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.24□□□□□ -0.29
CDK5Q00535 AC004241.5-201ENST00000623870 2448 ntBASIC13.24□□□□□ -0.29
CDK5Q00535 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CDK5Q00535 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.24□□□□□ -0.29
CDK5Q00535 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CDK5Q00535 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CDK5Q00535 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.24□□□□□ -0.29
CDK5Q00535 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CDK5Q00535 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CDK5Q00535 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CDK5Q00535 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDK5Q00535 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 PTENP1-202ENST00000532280 3996 ntBASIC13.23□□□□□ -0.29
CDK5Q00535 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.23□□□□□ -0.29
CDK5Q00535 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.23□□□□□ -0.29
CDK5Q00535 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.23□□□□□ -0.29
CDK5Q00535 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CDK5Q00535 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
CDK5Q00535 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.23□□□□□ -0.29
CDK5Q00535 POM121L8P-201ENST00000417732 1281 ntBASIC13.23□□□□□ -0.29
CDK5Q00535 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDK5Q00535 AL161932.2-201ENST00000435436 679 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms