Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 BTBD7P1-201ENST00000447253 1453 ntBASIC12.04□□□□□ -0.48
SPCS3P61009 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.04□□□□□ -0.48
SPCS3P61009 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.04□□□□□ -0.48
SPCS3P61009 AP006288.1-201ENST00000446065 395 ntBASIC12.04□□□□□ -0.48
SPCS3P61009 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.04□□□□□ -0.48
SPCS3P61009 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.04□□□□□ -0.48
SPCS3P61009 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
SPCS3P61009 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.04□□□□□ -0.48
SPCS3P61009 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.04□□□□□ -0.48
SPCS3P61009 AC025678.2-201ENST00000562061 970 ntBASIC12.04□□□□□ -0.48
SPCS3P61009 AC140878.1-201ENST00000565277 250 ntBASIC12.04□□□□□ -0.48
SPCS3P61009 AC036164.1-201ENST00000570544 333 ntBASIC12.04□□□□□ -0.48
SPCS3P61009 AC107373.2-201ENST00000607735 490 ntBASIC12.04□□□□□ -0.48
SPCS3P61009 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.04□□□□□ -0.48
SPCS3P61009 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 Z92544.3-201ENST00000624747 417 ntBASIC12.04□□□□□ -0.48
SPCS3P61009 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 TCAM1P-207ENST00000485295 1537 ntBASIC12.04□□□□□ -0.48
SPCS3P61009 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SPCS3P61009 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPCS3P61009 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 KRT8P14-201ENST00000414254 1442 ntBASIC12.03□□□□□ -0.48
SPCS3P61009 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.03□□□□□ -0.48
SPCS3P61009 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 PCDHB17P-202ENST00000623466 3066 ntBASIC12.03□□□□□ -0.48
SPCS3P61009 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SPCS3P61009 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SPCS3P61009 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SPCS3P61009 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.03□□□□□ -0.48
SPCS3P61009 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.03□□□□□ -0.48
SPCS3P61009 KRT18P13-201ENST00000400056 1290 ntBASIC12.03□□□□□ -0.48
SPCS3P61009 AC107890.1-201ENST00000422478 521 ntBASIC12.03□□□□□ -0.48
SPCS3P61009 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.03□□□□□ -0.48
SPCS3P61009 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.03□□□□□ -0.48
SPCS3P61009 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms