Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.08■□□□□ 0.32
RHBDL3P58872 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDL3P58872 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDL3P58872 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDL3P58872 CICP24-201ENST00000605464 2705 ntBASIC17.08■□□□□ 0.32
RHBDL3P58872 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDL3P58872 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDL3P58872 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RHBDL3P58872 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDL3P58872 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.08■□□□□ 0.32
RHBDL3P58872 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDL3P58872 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDL3P58872 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RHBDL3P58872 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDL3P58872 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDL3P58872 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDL3P58872 TNRC18P2-201ENST00000417666 2714 ntBASIC17.07■□□□□ 0.32
RHBDL3P58872 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.07■□□□□ 0.32
RHBDL3P58872 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RHBDL3P58872 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RHBDL3P58872 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDL3P58872 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDL3P58872 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RHBDL3P58872 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RHBDL3P58872 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.07■□□□□ 0.32
RHBDL3P58872 HIST2H2BA-201ENST00000412169 381 ntBASIC17.07■□□□□ 0.32
RHBDL3P58872 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.07■□□□□ 0.32
RHBDL3P58872 AC095040.1-201ENST00000513286 675 ntBASIC17.07■□□□□ 0.32
RHBDL3P58872 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.07■□□□□ 0.32
RHBDL3P58872 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.07■□□□□ 0.32
RHBDL3P58872 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RHBDL3P58872 NDUFB10P1-201ENST00000567319 521 ntBASIC17.07■□□□□ 0.32
RHBDL3P58872 MIR4750-201ENST00000584564 56 ntBASIC17.07■□□□□ 0.32
RHBDL3P58872 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.07■□□□□ 0.32
RHBDL3P58872 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDL3P58872 AC087392.5-201ENST00000612517 489 ntBASIC17.07■□□□□ 0.32
RHBDL3P58872 AP001267.2-201ENST00000532619 2086 ntBASIC17.07■□□□□ 0.32
RHBDL3P58872 AC232323.1-201ENST00000540724 2099 ntBASIC17.07■□□□□ 0.32
RHBDL3P58872 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RHBDL3P58872 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RHBDL3P58872 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
RHBDL3P58872 RN7SL832P-201ENST00000607781 1756 ntBASIC17.07■□□□□ 0.32
RHBDL3P58872 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDL3P58872 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RHBDL3P58872 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDL3P58872 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
RHBDL3P58872 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.07■□□□□ 0.32
RHBDL3P58872 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.06■□□□□ 0.32
RHBDL3P58872 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 AC046158.3-201ENST00000624947 2558 ntBASIC17.06■□□□□ 0.32
RHBDL3P58872 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.06■□□□□ 0.32
RHBDL3P58872 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.06■□□□□ 0.32
RHBDL3P58872 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RHBDL3P58872 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RHBDL3P58872 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 LINC00115-201ENST00000473798 1317 ntBASIC17.06■□□□□ 0.32
RHBDL3P58872 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
RHBDL3P58872 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RHBDL3P58872 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.06■□□□□ 0.32
RHBDL3P58872 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 GUSBP10-201ENST00000417412 665 ntBASIC17.06■□□□□ 0.32
RHBDL3P58872 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.06■□□□□ 0.32
RHBDL3P58872 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.06■□□□□ 0.32
RHBDL3P58872 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.06■□□□□ 0.32
RHBDL3P58872 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RHBDL3P58872 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.06■□□□□ 0.32
RHBDL3P58872 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.06■□□□□ 0.32
RHBDL3P58872 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.06■□□□□ 0.32
RHBDL3P58872 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.06■□□□□ 0.32
RHBDL3P58872 RN7SL665P-201ENST00000578793 300 ntBASIC17.06■□□□□ 0.32
RHBDL3P58872 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.06■□□□□ 0.32
RHBDL3P58872 AL133467.4-201ENST00000602953 725 ntBASIC17.06■□□□□ 0.32
RHBDL3P58872 AC107464.3-201ENST00000609172 737 ntBASIC17.06■□□□□ 0.32
RHBDL3P58872 MIR6858-201ENST00000620733 67 ntBASIC17.06■□□□□ 0.32
RHBDL3P58872 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RHBDL3P58872 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RHBDL3P58872 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RHBDL3P58872 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RHBDL3P58872 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RHBDL3P58872 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.05■□□□□ 0.32
RHBDL3P58872 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms