Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC002472.2-201ENST00000442739 958 ntBASIC14.4□□□□□ -0.1
CDH13P55290 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 MESTP3-201ENST00000503460 968 ntBASIC14.4□□□□□ -0.1
CDH13P55290 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.4□□□□□ -0.1
CDH13P55290 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.4□□□□□ -0.1
CDH13P55290 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.4□□□□□ -0.1
CDH13P55290 AC103988.2-201ENST00000561804 725 ntBASIC14.4□□□□□ -0.1
CDH13P55290 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH13P55290 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CDH13P55290 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDH13P55290 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CDH13P55290 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH13P55290 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH13P55290 AC139712.1-201ENST00000378256 1875 ntBASIC14.4□□□□□ -0.1
CDH13P55290 FKBP4P6-201ENST00000457486 1332 ntBASIC14.4□□□□□ -0.1
CDH13P55290 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
CDH13P55290 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CDH13P55290 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH13P55290 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDH13P55290 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDH13P55290 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH13P55290 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH13P55290 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDH13P55290 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDH13P55290 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH13P55290 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH13P55290 BCRP1-201ENST00000444246 691 ntBASIC14.39□□□□□ -0.11
CDH13P55290 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH13P55290 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDH13P55290 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH13P55290 AC140912.1-201ENST00000577171 1054 ntBASIC14.39□□□□□ -0.11
CDH13P55290 MIR6074-201ENST00000612054 107 ntBASIC14.39□□□□□ -0.11
CDH13P55290 AC138466.3-201ENST00000619983 221 ntBASIC14.39□□□□□ -0.11
CDH13P55290 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDH13P55290 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH13P55290 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDH13P55290 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH13P55290 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH13P55290 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDH13P55290 AC134312.5-201ENST00000568031 1313 ntBASIC14.39□□□□□ -0.11
CDH13P55290 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH13P55290 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH13P55290 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH13P55290 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 AC009093.2-202ENST00000620513 2079 ntBASIC14.38□□□□□ -0.11
CDH13P55290 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDH13P55290 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH13P55290 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
CDH13P55290 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDH13P55290 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH13P55290 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms