Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
GTF2A1P52655 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.42□□□□□ -0.1
GTF2A1P52655 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.42□□□□□ -0.1
GTF2A1P52655 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 AC012313.8-201ENST00000595059 5402 ntBASIC14.42□□□□□ -0.1
GTF2A1P52655 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.42□□□□□ -0.1
GTF2A1P52655 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.42□□□□□ -0.1
GTF2A1P52655 ATP5G2P1-201ENST00000433580 426 ntBASIC14.42□□□□□ -0.1
GTF2A1P52655 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
GTF2A1P52655 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.42□□□□□ -0.1
GTF2A1P52655 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 AL160237.2-201ENST00000556165 472 ntBASIC14.42□□□□□ -0.1
GTF2A1P52655 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.42□□□□□ -0.1
GTF2A1P52655 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.42□□□□□ -0.1
GTF2A1P52655 AL355877.3-201ENST00000622820 899 ntBASIC14.42□□□□□ -0.1
GTF2A1P52655 AP000550.4-202ENST00000639755 178 ntBASIC14.42□□□□□ -0.1
GTF2A1P52655 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.42□□□□□ -0.1
GTF2A1P52655 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC14.42□□□□□ -0.1
GTF2A1P52655 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.42□□□□□ -0.1
GTF2A1P52655 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.42□□□□□ -0.1
GTF2A1P52655 AC073862.5-201ENST00000624129 2027 ntBASIC14.42□□□□□ -0.1
GTF2A1P52655 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC14.42□□□□□ -0.1
GTF2A1P52655 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.42□□□□□ -0.1
GTF2A1P52655 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC14.42□□□□□ -0.1
GTF2A1P52655 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC14.42□□□□□ -0.1
GTF2A1P52655 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC14.42□□□□□ -0.1
GTF2A1P52655 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GTF2A1P52655 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.42□□□□□ -0.1
GTF2A1P52655 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GTF2A1P52655 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.41□□□□□ -0.1
GTF2A1P52655 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
GTF2A1P52655 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.41□□□□□ -0.1
GTF2A1P52655 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.41□□□□□ -0.1
GTF2A1P52655 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
GTF2A1P52655 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.41□□□□□ -0.1
GTF2A1P52655 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC14.41□□□□□ -0.1
GTF2A1P52655 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.41□□□□□ -0.1
GTF2A1P52655 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GTF2A1P52655 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.41□□□□□ -0.1
GTF2A1P52655 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.41□□□□□ -0.1
GTF2A1P52655 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.41□□□□□ -0.1
GTF2A1P52655 FGFR3P6-201ENST00000457012 610 ntBASIC14.41□□□□□ -0.1
GTF2A1P52655 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
GTF2A1P52655 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.41□□□□□ -0.1
GTF2A1P52655 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.41□□□□□ -0.1
GTF2A1P52655 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.41□□□□□ -0.1
GTF2A1P52655 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.41□□□□□ -0.1
GTF2A1P52655 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 AC011467.4-201ENST00000594891 528 ntBASIC14.41□□□□□ -0.1
GTF2A1P52655 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GTF2A1P52655 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
GTF2A1P52655 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.41□□□□□ -0.1
GTF2A1P52655 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 AC020910.6-201ENST00000623084 1459 ntBASIC14.41□□□□□ -0.1
GTF2A1P52655 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.41□□□□□ -0.1
GTF2A1P52655 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC14.41□□□□□ -0.1
GTF2A1P52655 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GTF2A1P52655 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms