Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.11□□□□□ -0.31
CDKN2AP42771 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.11□□□□□ -0.31
CDKN2AP42771 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 AP006294.1-201ENST00000415407 339 ntBASIC13.11□□□□□ -0.31
CDKN2AP42771 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.11□□□□□ -0.31
CDKN2AP42771 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 AL355864.2-201ENST00000447420 863 ntBASIC13.11□□□□□ -0.31
CDKN2AP42771 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.11□□□□□ -0.31
CDKN2AP42771 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.11□□□□□ -0.31
CDKN2AP42771 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.11□□□□□ -0.31
CDKN2AP42771 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.11□□□□□ -0.31
CDKN2AP42771 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.11□□□□□ -0.31
CDKN2AP42771 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CDKN2AP42771 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
CDKN2AP42771 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CDKN2AP42771 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CDKN2AP42771 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.11□□□□□ -0.31
CDKN2AP42771 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CDKN2AP42771 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN2AP42771 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CDKN2AP42771 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDKN2AP42771 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CDKN2AP42771 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
CDKN2AP42771 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.1□□□□□ -0.31
CDKN2AP42771 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.1□□□□□ -0.31
CDKN2AP42771 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.1□□□□□ -0.31
CDKN2AP42771 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CDKN2AP42771 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
CDKN2AP42771 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
CDKN2AP42771 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 AC004945.1-201ENST00000416738 983 ntBASIC13.1□□□□□ -0.31
CDKN2AP42771 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.1□□□□□ -0.31
CDKN2AP42771 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.1□□□□□ -0.31
CDKN2AP42771 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.1□□□□□ -0.31
CDKN2AP42771 RN7SL837P-201ENST00000463010 287 ntBASIC13.1□□□□□ -0.31
CDKN2AP42771 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.1□□□□□ -0.31
CDKN2AP42771 AC011495.1-201ENST00000498085 584 ntBASIC13.1□□□□□ -0.31
CDKN2AP42771 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.1□□□□□ -0.31
CDKN2AP42771 AP003171.2-201ENST00000528208 925 ntBASIC13.1□□□□□ -0.31
CDKN2AP42771 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.1□□□□□ -0.31
CDKN2AP42771 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CDKN2AP42771 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.1□□□□□ -0.31
CDKN2AP42771 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.1□□□□□ -0.31
CDKN2AP42771 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.1□□□□□ -0.31
CDKN2AP42771 AL355385.1-201ENST00000606123 409 ntBASIC13.1□□□□□ -0.31
CDKN2AP42771 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDKN2AP42771 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.1□□□□□ -0.31
CDKN2AP42771 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.1□□□□□ -0.31
CDKN2AP42771 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.1□□□□□ -0.31
CDKN2AP42771 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms