Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 COX5BP8-201ENST00000416911 349 ntBASIC12.33□□□□□ -0.44
LMO1P25800 NME2P1-201ENST00000426182 414 ntBASIC12.33□□□□□ -0.44
LMO1P25800 FAM197Y7-201ENST00000432892 766 ntBASIC12.33□□□□□ -0.44
LMO1P25800 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.33□□□□□ -0.44
LMO1P25800 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 AL035414.1-201ENST00000451327 857 ntBASIC12.33□□□□□ -0.44
LMO1P25800 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO1P25800 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO1P25800 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO1P25800 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
LMO1P25800 RN7SL713P-201ENST00000582127 302 ntBASIC12.33□□□□□ -0.44
LMO1P25800 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.33□□□□□ -0.44
LMO1P25800 OR10B1P-201ENST00000601666 907 ntBASIC12.33□□□□□ -0.44
LMO1P25800 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO1P25800 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO1P25800 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LMO1P25800 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 IGHV3-72-202ENST00000621503 303 ntBASIC12.33□□□□□ -0.44
LMO1P25800 AC002472.3-201ENST00000640124 621 ntBASIC12.33□□□□□ -0.44
LMO1P25800 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO1P25800 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
LMO1P25800 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO1P25800 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO1P25800 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
LMO1P25800 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LMO1P25800 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO1P25800 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LMO1P25800 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LMO1P25800 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO1P25800 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 AC083964.2-201ENST00000623988 2396 ntBASIC12.33□□□□□ -0.44
LMO1P25800 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO1P25800 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO1P25800 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LMO1P25800 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO1P25800 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LMO1P25800 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LMO1P25800 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO1P25800 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 AL136309.1-201ENST00000403917 691 ntBASIC12.32□□□□□ -0.44
LMO1P25800 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO1P25800 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 AC007274.1-201ENST00000439805 662 ntBASIC12.32□□□□□ -0.44
LMO1P25800 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO1P25800 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO1P25800 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
LMO1P25800 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO1P25800 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO1P25800 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO1P25800 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.32□□□□□ -0.44
LMO1P25800 AC078819.1-201ENST00000547454 765 ntBASIC12.32□□□□□ -0.44
LMO1P25800 AC012085.1-201ENST00000548270 765 ntBASIC12.32□□□□□ -0.44
LMO1P25800 KRT90P-201ENST00000549264 1064 ntBASIC12.32□□□□□ -0.44
LMO1P25800 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms