Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 AC118758.2-201ENST00000614242 2813 ntBASIC14.49□□□□□ -0.09
CDH3P22223 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 CLUHP2-201ENST00000426660 1303 ntBASIC14.49□□□□□ -0.09
CDH3P22223 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 AC091951.1-201ENST00000512854 2465 ntBASIC14.49□□□□□ -0.09
CDH3P22223 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDH3P22223 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH3P22223 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 MIR1908-201ENST00000410394 80 ntBASIC14.49□□□□□ -0.09
CDH3P22223 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 ACTBP11-201ENST00000436287 1126 ntBASIC14.49□□□□□ -0.09
CDH3P22223 CNN2P10-201ENST00000443067 918 ntBASIC14.49□□□□□ -0.09
CDH3P22223 Z93015.1-201ENST00000451718 390 ntBASIC14.49□□□□□ -0.09
CDH3P22223 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CDH3P22223 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH3P22223 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH3P22223 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH3P22223 AC138466.3-201ENST00000619983 221 ntBASIC14.49□□□□□ -0.09
CDH3P22223 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH3P22223 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH3P22223 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH3P22223 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH3P22223 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDH3P22223 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH3P22223 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDH3P22223 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 FKBP4P6-201ENST00000457486 1332 ntBASIC14.48□□□□□ -0.09
CDH3P22223 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH3P22223 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CDH3P22223 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH3P22223 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDH3P22223 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 PFN1P12-201ENST00000455938 534 ntBASIC14.48□□□□□ -0.09
CDH3P22223 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH3P22223 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 AC106820.3-201ENST00000561653 397 ntBASIC14.48□□□□□ -0.09
CDH3P22223 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH3P22223 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH3P22223 RN7SL713P-201ENST00000582127 302 ntBASIC14.48□□□□□ -0.09
CDH3P22223 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH3P22223 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH3P22223 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH3P22223 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms