Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.94□□□□□ -0.34
ATF1P18846 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.94□□□□□ -0.34
ATF1P18846 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.94□□□□□ -0.34
ATF1P18846 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.93□□□□□ -0.34
ATF1P18846 AC072061.1-201ENST00000569710 2234 ntBASIC12.93□□□□□ -0.34
ATF1P18846 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 INTS4P2-202ENST00000614726 2019 ntBASIC12.93□□□□□ -0.34
ATF1P18846 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.93□□□□□ -0.34
ATF1P18846 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.93□□□□□ -0.34
ATF1P18846 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.93□□□□□ -0.34
ATF1P18846 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.93□□□□□ -0.34
ATF1P18846 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.93□□□□□ -0.34
ATF1P18846 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.93□□□□□ -0.34
ATF1P18846 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 AC022616.1-201ENST00000518688 554 ntBASIC12.93□□□□□ -0.34
ATF1P18846 AP001582.1-201ENST00000525856 295 ntBASIC12.93□□□□□ -0.34
ATF1P18846 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.93□□□□□ -0.34
ATF1P18846 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.93□□□□□ -0.34
ATF1P18846 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.93□□□□□ -0.34
ATF1P18846 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATF1P18846 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.92□□□□□ -0.34
ATF1P18846 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.92□□□□□ -0.34
ATF1P18846 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms