Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.28□□□□□ -0.12
KRT6AP02538 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
KRT6AP02538 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KRT6AP02538 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.28□□□□□ -0.12
KRT6AP02538 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT6AP02538 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT6AP02538 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 DGCR5-201ENST00000399539 862 ntBASIC14.28□□□□□ -0.12
KRT6AP02538 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.28□□□□□ -0.12
KRT6AP02538 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
KRT6AP02538 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
KRT6AP02538 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.28□□□□□ -0.12
KRT6AP02538 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.28□□□□□ -0.12
KRT6AP02538 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.28□□□□□ -0.12
KRT6AP02538 AC068587.3-201ENST00000526613 355 ntBASIC14.28□□□□□ -0.12
KRT6AP02538 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
KRT6AP02538 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.28□□□□□ -0.12
KRT6AP02538 TDH-203ENST00000531764 1110 ntBASIC14.28□□□□□ -0.12
KRT6AP02538 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.28□□□□□ -0.12
KRT6AP02538 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KRT6AP02538 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KRT6AP02538 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.28□□□□□ -0.12
KRT6AP02538 AC041040.2-201ENST00000622926 2899 ntBASIC14.28□□□□□ -0.12
KRT6AP02538 AC020910.6-201ENST00000623084 1459 ntBASIC14.28□□□□□ -0.12
KRT6AP02538 AC016397.2-201ENST00000624848 1985 ntBASIC14.28□□□□□ -0.12
KRT6AP02538 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT6AP02538 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
KRT6AP02538 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.28□□□□□ -0.12
KRT6AP02538 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.28□□□□□ -0.12
KRT6AP02538 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6AP02538 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6AP02538 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6AP02538 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6AP02538 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6AP02538 MSTO2P-201ENST00000314835 1709 ntBASIC14.27□□□□□ -0.12
KRT6AP02538 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6AP02538 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6AP02538 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.27□□□□□ -0.12
KRT6AP02538 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.27□□□□□ -0.12
KRT6AP02538 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.27□□□□□ -0.12
KRT6AP02538 TCAM1P-207ENST00000485295 1537 ntBASIC14.27□□□□□ -0.12
KRT6AP02538 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6AP02538 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
KRT6AP02538 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6AP02538 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
KRT6AP02538 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
KRT6AP02538 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.27□□□□□ -0.13
KRT6AP02538 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.27□□□□□ -0.13
KRT6AP02538 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.27□□□□□ -0.13
KRT6AP02538 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 AC103988.2-201ENST00000561804 725 ntBASIC14.27□□□□□ -0.13
KRT6AP02538 MIR5189-201ENST00000577370 114 ntBASIC14.27□□□□□ -0.13
KRT6AP02538 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.27□□□□□ -0.13
KRT6AP02538 BX088702.1-201ENST00000610784 235 ntBASIC14.27□□□□□ -0.13
KRT6AP02538 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
KRT6AP02538 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.27□□□□□ -0.13
KRT6AP02538 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.27□□□□□ -0.13
KRT6AP02538 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
KRT6AP02538 AC139712.1-201ENST00000378256 1875 ntBASIC14.27□□□□□ -0.13
KRT6AP02538 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.27□□□□□ -0.13
KRT6AP02538 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6AP02538 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6AP02538 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.26□□□□□ -0.13
KRT6AP02538 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6AP02538 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6AP02538 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6AP02538 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
KRT6AP02538 MST1P2-201ENST00000457982 2291 ntBASIC14.26□□□□□ -0.13
KRT6AP02538 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6AP02538 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KRT6AP02538 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms