Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SDCBPO00560 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SDCBPO00560 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SDCBPO00560 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SDCBPO00560 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 SLC7A15P-201ENST00000424028 1363 ntBASIC12.56□□□□□ -0.4
SDCBPO00560 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SDCBPO00560 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SDCBPO00560 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
SDCBPO00560 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.56□□□□□ -0.4
SDCBPO00560 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SDCBPO00560 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SDCBPO00560 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SDCBPO00560 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SDCBPO00560 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SDCBPO00560 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.56□□□□□ -0.4
SDCBPO00560 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 UGT1A2P-201ENST00000454886 866 ntBASIC12.56□□□□□ -0.4
SDCBPO00560 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.56□□□□□ -0.4
SDCBPO00560 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.56□□□□□ -0.4
SDCBPO00560 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.56□□□□□ -0.4
SDCBPO00560 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.56□□□□□ -0.4
SDCBPO00560 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.56□□□□□ -0.4
SDCBPO00560 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.56□□□□□ -0.4
SDCBPO00560 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.56□□□□□ -0.4
SDCBPO00560 AC099568.2-201ENST00000609194 695 ntBASIC12.56□□□□□ -0.4
SDCBPO00560 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.56□□□□□ -0.4
SDCBPO00560 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.56□□□□□ -0.4
SDCBPO00560 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
SDCBPO00560 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SDCBPO00560 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SDCBPO00560 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.56□□□□□ -0.4
SDCBPO00560 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SDCBPO00560 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.55□□□□□ -0.4
SDCBPO00560 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.55□□□□□ -0.4
SDCBPO00560 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SDCBPO00560 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.55□□□□□ -0.4
SDCBPO00560 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.55□□□□□ -0.4
SDCBPO00560 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.55□□□□□ -0.4
SDCBPO00560 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SDCBPO00560 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SDCBPO00560 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.55□□□□□ -0.4
SDCBPO00560 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.55□□□□□ -0.4
SDCBPO00560 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SDCBPO00560 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SDCBPO00560 AL645937.2-201ENST00000396808 931 ntBASIC12.55□□□□□ -0.4
SDCBPO00560 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.55□□□□□ -0.4
SDCBPO00560 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 C1QBPP1-201ENST00000400117 770 ntBASIC12.55□□□□□ -0.4
SDCBPO00560 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.55□□□□□ -0.4
SDCBPO00560 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SDCBPO00560 NUS1P3-201ENST00000423502 862 ntBASIC12.55□□□□□ -0.4
SDCBPO00560 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.55□□□□□ -0.4
SDCBPO00560 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SDCBPO00560 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.55□□□□□ -0.4
SDCBPO00560 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.55□□□□□ -0.4
SDCBPO00560 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.55□□□□□ -0.4
SDCBPO00560 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.55□□□□□ -0.4
SDCBPO00560 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.55□□□□□ -0.4
SDCBPO00560 AC120045.2-201ENST00000567334 178 ntBASIC12.55□□□□□ -0.4
SDCBPO00560 MIR497HG-202ENST00000572453 3838 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms