Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.93□□□□□ -0.02
HACD3Q9P035 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HACD3Q9P035 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HACD3Q9P035 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HACD3Q9P035 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.93□□□□□ -0.02
HACD3Q9P035 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.93□□□□□ -0.02
HACD3Q9P035 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HACD3Q9P035 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.93□□□□□ -0.02
HACD3Q9P035 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HACD3Q9P035 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.93□□□□□ -0.02
HACD3Q9P035 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HACD3Q9P035 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HACD3Q9P035 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.93□□□□□ -0.02
HACD3Q9P035 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HACD3Q9P035 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HACD3Q9P035 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.93□□□□□ -0.02
HACD3Q9P035 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HACD3Q9P035 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
HACD3Q9P035 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HACD3Q9P035 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HACD3Q9P035 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.92□□□□□ -0.02
HACD3Q9P035 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.92□□□□□ -0.02
HACD3Q9P035 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 AL136309.1-201ENST00000403917 691 ntBASIC14.92□□□□□ -0.02
HACD3Q9P035 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 MIR1202-201ENST00000408529 83 ntBASIC14.92□□□□□ -0.02
HACD3Q9P035 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.92□□□□□ -0.02
HACD3Q9P035 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.92□□□□□ -0.02
HACD3Q9P035 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 CTBP2P5-201ENST00000454986 1264 ntBASIC14.92□□□□□ -0.02
HACD3Q9P035 AC104989.1-201ENST00000519711 778 ntBASIC14.92□□□□□ -0.02
HACD3Q9P035 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.92□□□□□ -0.02
HACD3Q9P035 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.92□□□□□ -0.02
HACD3Q9P035 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.92□□□□□ -0.02
HACD3Q9P035 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.92□□□□□ -0.02
HACD3Q9P035 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.92□□□□□ -0.02
HACD3Q9P035 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.92□□□□□ -0.02
HACD3Q9P035 ZACNP1-201ENST00000612259 710 ntBASIC14.92□□□□□ -0.02
HACD3Q9P035 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 AC020910.5-201ENST00000623668 1865 ntBASIC14.92□□□□□ -0.02
HACD3Q9P035 INE2-201ENST00000630399 1874 ntBASIC14.92□□□□□ -0.02
HACD3Q9P035 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.92□□□□□ -0.02
HACD3Q9P035 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
HACD3Q9P035 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HACD3Q9P035 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
HACD3Q9P035 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.92□□□□□ -0.02
HACD3Q9P035 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HACD3Q9P035 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.92□□□□□ -0.02
HACD3Q9P035 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 PEG13-201ENST00000631594 5667 ntBASIC14.91□□□□□ -0.02
HACD3Q9P035 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
HACD3Q9P035 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
HACD3Q9P035 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HACD3Q9P035 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HACD3Q9P035 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.91□□□□□ -0.02
HACD3Q9P035 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
HACD3Q9P035 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
HACD3Q9P035 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HACD3Q9P035 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.91□□□□□ -0.02
HACD3Q9P035 ACA64.2-201ENST00000459014 129 ntBASIC14.91□□□□□ -0.02
HACD3Q9P035 AC022447.6-201ENST00000515522 438 ntBASIC14.91□□□□□ -0.02
HACD3Q9P035 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.91□□□□□ -0.02
HACD3Q9P035 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
HACD3Q9P035 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HACD3Q9P035 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 AC002472.3-201ENST00000640124 621 ntBASIC14.91□□□□□ -0.02
HACD3Q9P035 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms