Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AL139400.1-201ENST00000366220 510 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AC211486.1-202ENST00000416371 468 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AC004945.1-201ENST00000416738 983 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 FAM86LP-201ENST00000478302 853 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 RPL13AP25-201ENST00000484130 612 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AC211476.1-201ENST00000503899 468 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AC092865.5-201ENST00000545435 363 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AL049840.4-201ENST00000602422 811 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AC011498.7-201ENST00000624986 2027 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 DDC-213ENST00000617822 1809 ntTSL 3 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 HPD-204ENST00000543163 1709 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 MRPL37P1-201ENST00000592451 1337 ntBASIC18.09■□□□□ 0.49
UPF2Q9HAU5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 AC254562.1-201ENST00000417586 456 ntBASIC18.09■□□□□ 0.49
UPF2Q9HAU5 CROT-203ENST00000419147 2959 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 AL121894.2-201ENST00000602977 491 ntBASIC18.09■□□□□ 0.49
UPF2Q9HAU5 AL603764.1-201ENST00000636452 321 ntBASIC18.09■□□□□ 0.49
UPF2Q9HAU5 PRSS30P-206ENST00000641773 873 ntBASIC18.09■□□□□ 0.49
UPF2Q9HAU5 SON-203ENST00000381679 7860 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF2Q9HAU5 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 DGCR9-201ENST00000609630 2415 ntBASIC18.08■□□□□ 0.49
UPF2Q9HAU5 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 AC099521.3-201ENST00000624251 2938 ntBASIC18.08■□□□□ 0.49
UPF2Q9HAU5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF2Q9HAU5 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.08■□□□□ 0.48
UPF2Q9HAU5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.08■□□□□ 0.48
UPF2Q9HAU5 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 AC010327.4-202ENST00000591484 748 ntBASIC18.08■□□□□ 0.48
UPF2Q9HAU5 AL844908.2-201ENST00000609461 460 ntBASIC18.08■□□□□ 0.48
UPF2Q9HAU5 AL391069.4-201ENST00000609583 481 ntBASIC18.08■□□□□ 0.48
UPF2Q9HAU5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 AC005562.1-201ENST00000583030 3219 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms