Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 UBE2V2P4-201ENST00000447495 259 ntBASIC13.36□□□□□ -0.27
USB1Q9BQ65 AC119751.2-201ENST00000504529 210 ntBASIC13.36□□□□□ -0.27
USB1Q9BQ65 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 AP003168.1-201ENST00000530091 307 ntBASIC13.36□□□□□ -0.27
USB1Q9BQ65 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 AC006453.4-201ENST00000636949 1252 ntBASIC13.36□□□□□ -0.27
USB1Q9BQ65 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
USB1Q9BQ65 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.36□□□□□ -0.27
USB1Q9BQ65 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 AL158070.2-201ENST00000623713 1621 ntBASIC13.35□□□□□ -0.27
USB1Q9BQ65 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 AC092127.1-201ENST00000567093 3455 ntBASIC13.35□□□□□ -0.27
USB1Q9BQ65 AL138709.1-201ENST00000614840 1693 ntBASIC13.35□□□□□ -0.27
USB1Q9BQ65 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 MIR193BHG-211ENST00000641433 5365 ntBASIC13.35□□□□□ -0.27
USB1Q9BQ65 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 GHSR-202ENST00000427970 912 ntBASIC13.35□□□□□ -0.27
USB1Q9BQ65 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 AC114495.2-201ENST00000452686 437 ntBASIC13.35□□□□□ -0.27
USB1Q9BQ65 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 AC090680.1-201ENST00000464696 860 ntBASIC13.35□□□□□ -0.27
USB1Q9BQ65 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 GNRHR2-203ENST00000581100 1187 ntBASIC13.35□□□□□ -0.27
USB1Q9BQ65 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 AHCYP2-201ENST00000430630 1300 ntBASIC13.35□□□□□ -0.27
USB1Q9BQ65 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.35□□□□□ -0.27
USB1Q9BQ65 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
USB1Q9BQ65 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 AC083899.2-201ENST00000423285 1376 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms