Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ARID3AQ99856 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
ARID3AQ99856 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ARID3AQ99856 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ARID3AQ99856 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
ARID3AQ99856 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ARID3AQ99856 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
ARID3AQ99856 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.89■□□□□ 0.29
ARID3AQ99856 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 POM121L4P-202ENST00000427789 1891 ntBASIC16.89■□□□□ 0.29
ARID3AQ99856 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ARID3AQ99856 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.89■□□□□ 0.29
ARID3AQ99856 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.89■□□□□ 0.29
ARID3AQ99856 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.89■□□□□ 0.29
ARID3AQ99856 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.89■□□□□ 0.29
ARID3AQ99856 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.89■□□□□ 0.29
ARID3AQ99856 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.89■□□□□ 0.29
ARID3AQ99856 ZNF890P-202ENST00000530367 1156 ntBASIC16.89■□□□□ 0.29
ARID3AQ99856 AC011467.4-201ENST00000594891 528 ntBASIC16.89■□□□□ 0.29
ARID3AQ99856 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.89■□□□□ 0.29
ARID3AQ99856 AC074044.1-201ENST00000609673 707 ntBASIC16.89■□□□□ 0.29
ARID3AQ99856 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC16.89■□□□□ 0.29
ARID3AQ99856 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.89■□□□□ 0.29
ARID3AQ99856 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.89■□□□□ 0.29
ARID3AQ99856 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC16.89■□□□□ 0.29
ARID3AQ99856 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 AC023024.2-201ENST00000623561 1993 ntBASIC16.89■□□□□ 0.29
ARID3AQ99856 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 AC022144.1-201ENST00000602255 1580 ntBASIC16.89■□□□□ 0.29
ARID3AQ99856 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.89■□□□□ 0.29
ARID3AQ99856 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ARID3AQ99856 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.88■□□□□ 0.29
ARID3AQ99856 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.88■□□□□ 0.29
ARID3AQ99856 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 SON-203ENST00000381679 7860 ntTSL 5 BASIC16.88■□□□□ 0.29
ARID3AQ99856 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC16.88■□□□□ 0.29
ARID3AQ99856 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.88■□□□□ 0.29
ARID3AQ99856 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.88■□□□□ 0.29
ARID3AQ99856 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ARID3AQ99856 BASP1P1-201ENST00000430708 665 ntBASIC16.88■□□□□ 0.29
ARID3AQ99856 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.88■□□□□ 0.29
ARID3AQ99856 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.88■□□□□ 0.29
ARID3AQ99856 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 SLED1-202ENST00000512051 380 ntBASIC16.88■□□□□ 0.29
ARID3AQ99856 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.88■□□□□ 0.29
ARID3AQ99856 SDHAP3-202ENST00000515467 728 ntBASIC16.88■□□□□ 0.29
ARID3AQ99856 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.88■□□□□ 0.29
ARID3AQ99856 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.88■□□□□ 0.29
ARID3AQ99856 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.88■□□□□ 0.29
ARID3AQ99856 AC004461.2-201ENST00000629517 803 ntBASIC16.88■□□□□ 0.29
ARID3AQ99856 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.88■□□□□ 0.29
ARID3AQ99856 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC16.88■□□□□ 0.29
ARID3AQ99856 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.88■□□□□ 0.29
ARID3AQ99856 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ARID3AQ99856 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.88■□□□□ 0.29
ARID3AQ99856 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC16.88■□□□□ 0.29
ARID3AQ99856 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARID3AQ99856 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC16.88■□□□□ 0.29
ARID3AQ99856 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ARID3AQ99856 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC16.87■□□□□ 0.29
ARID3AQ99856 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
ARID3AQ99856 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ARID3AQ99856 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ARID3AQ99856 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ARID3AQ99856 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms