Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.31□□□□□ -0.12
PKP4Q99569 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PKP4Q99569 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PKP4Q99569 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.31□□□□□ -0.12
PKP4Q99569 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.31□□□□□ -0.12
PKP4Q99569 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PKP4Q99569 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.31□□□□□ -0.12
PKP4Q99569 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PKP4Q99569 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKP4Q99569 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.31□□□□□ -0.12
PKP4Q99569 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.3□□□□□ -0.12
PKP4Q99569 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PKP4Q99569 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PKP4Q99569 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.3□□□□□ -0.12
PKP4Q99569 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.3□□□□□ -0.12
PKP4Q99569 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.3□□□□□ -0.12
PKP4Q99569 RN7SL832P-201ENST00000607781 1756 ntBASIC14.3□□□□□ -0.12
PKP4Q99569 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.3□□□□□ -0.12
PKP4Q99569 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.3□□□□□ -0.12
PKP4Q99569 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.3□□□□□ -0.12
PKP4Q99569 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.3□□□□□ -0.12
PKP4Q99569 FAM21FP-201ENST00000426241 1131 ntBASIC14.3□□□□□ -0.12
PKP4Q99569 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 AL035414.1-201ENST00000451327 857 ntBASIC14.3□□□□□ -0.12
PKP4Q99569 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.3□□□□□ -0.12
PKP4Q99569 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PKP4Q99569 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.3□□□□□ -0.12
PKP4Q99569 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.3□□□□□ -0.12
PKP4Q99569 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.3□□□□□ -0.12
PKP4Q99569 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.3□□□□□ -0.12
PKP4Q99569 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.3□□□□□ -0.12
PKP4Q99569 AC010328.2-201ENST00000597698 1111 ntBASIC14.3□□□□□ -0.12
PKP4Q99569 AC009542.2-202ENST00000619004 1067 ntBASIC14.3□□□□□ -0.12
PKP4Q99569 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PKP4Q99569 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.3□□□□□ -0.12
PKP4Q99569 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.3□□□□□ -0.12
PKP4Q99569 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.3□□□□□ -0.12
PKP4Q99569 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PKP4Q99569 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 AC067750.1-201ENST00000608826 6545 ntBASIC14.3□□□□□ -0.12
PKP4Q99569 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
PKP4Q99569 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PKP4Q99569 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.3□□□□□ -0.12
PKP4Q99569 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
PKP4Q99569 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKP4Q99569 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.29□□□□□ -0.12
PKP4Q99569 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PKP4Q99569 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms