Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RPRD1AQ96P16 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPRD1AQ96P16 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RPRD1AQ96P16 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 AC004899.1-201ENST00000424687 1714 ntBASIC15.13■□□□□ 0.01
RPRD1AQ96P16 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 AL157407.1-201ENST00000435784 904 ntBASIC15.13■□□□□ 0.01
RPRD1AQ96P16 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 SERPINA13P-202ENST00000478994 924 ntBASIC15.13■□□□□ 0.01
RPRD1AQ96P16 AC099548.2-209ENST00000480264 625 ntBASIC15.13■□□□□ 0.01
RPRD1AQ96P16 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 AC005962.1-201ENST00000584100 773 ntBASIC15.13■□□□□ 0.01
RPRD1AQ96P16 BNIP3P13-201ENST00000599968 566 ntBASIC15.13■□□□□ 0.01
RPRD1AQ96P16 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 GPR182-203ENST00000622922 591 ntBASIC15.13■□□□□ 0.01
RPRD1AQ96P16 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 AC009093.10-201ENST00000641956 1442 ntBASIC15.13■□□□□ 0.01
RPRD1AQ96P16 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPRD1AQ96P16 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 AC140479.7-201ENST00000636301 2332 ntBASIC15.12■□□□□ 0.01
RPRD1AQ96P16 AC020907.1-201ENST00000616460 1350 ntBASIC15.12■□□□□ 0.01
RPRD1AQ96P16 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 AC106794.1-201ENST00000506935 792 ntBASIC15.12■□□□□ 0.01
RPRD1AQ96P16 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 AC005740.2-201ENST00000511085 419 ntBASIC15.12■□□□□ 0.01
RPRD1AQ96P16 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 AC022748.3-201ENST00000621828 275 ntBASIC15.12■□□□□ 0.01
RPRD1AQ96P16 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 Z98259.2-201ENST00000641583 609 ntBASIC15.12■□□□□ 0.01
RPRD1AQ96P16 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPRD1AQ96P16 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 MYADML-201ENST00000474610 2147 ntBASIC15.11■□□□□ 0.01
RPRD1AQ96P16 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms