Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.63□□□□□ -0.23
HPS1Q92902 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HPS1Q92902 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.63□□□□□ -0.23
HPS1Q92902 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.63□□□□□ -0.23
HPS1Q92902 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC13.63□□□□□ -0.23
HPS1Q92902 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC13.63□□□□□ -0.23
HPS1Q92902 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 AC105021.1-202ENST00000570572 669 ntBASIC13.63□□□□□ -0.23
HPS1Q92902 AC090079.2-201ENST00000575289 768 ntBASIC13.63□□□□□ -0.23
HPS1Q92902 SPDYE22P-201ENST00000582158 798 ntBASIC13.63□□□□□ -0.23
HPS1Q92902 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 RN7SL828P-201ENST00000607615 303 ntBASIC13.63□□□□□ -0.23
HPS1Q92902 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HPS1Q92902 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.63□□□□□ -0.23
HPS1Q92902 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HPS1Q92902 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HPS1Q92902 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.63□□□□□ -0.23
HPS1Q92902 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.63□□□□□ -0.23
HPS1Q92902 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HPS1Q92902 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HPS1Q92902 AC023090.2-201ENST00000625182 2110 ntBASIC13.63□□□□□ -0.23
HPS1Q92902 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.63□□□□□ -0.23
HPS1Q92902 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HPS1Q92902 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HPS1Q92902 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HPS1Q92902 MIR497HG-202ENST00000572453 3838 ntBASIC13.62□□□□□ -0.23
HPS1Q92902 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HPS1Q92902 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HPS1Q92902 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.62□□□□□ -0.23
HPS1Q92902 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.62□□□□□ -0.23
HPS1Q92902 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HPS1Q92902 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HPS1Q92902 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HPS1Q92902 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.62□□□□□ -0.23
HPS1Q92902 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.62□□□□□ -0.23
HPS1Q92902 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC13.62□□□□□ -0.23
HPS1Q92902 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.62□□□□□ -0.23
HPS1Q92902 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.62□□□□□ -0.23
HPS1Q92902 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.62□□□□□ -0.23
HPS1Q92902 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 AC009477.1-201ENST00000452936 217 ntBASIC13.62□□□□□ -0.23
HPS1Q92902 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.62□□□□□ -0.23
HPS1Q92902 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 TEX28P1-201ENST00000613479 1221 ntBASIC13.62□□□□□ -0.23
HPS1Q92902 AL662799.1-202ENST00000614205 422 ntBASIC13.62□□□□□ -0.23
HPS1Q92902 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 TEX28P2-201ENST00000617764 1221 ntBASIC13.62□□□□□ -0.23
HPS1Q92902 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HPS1Q92902 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms