Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS8Q8N3P4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 BAX-205ENST00000391871 687 ntTSL 5 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 KRT18P15-201ENST00000458108 1291 ntBASIC22.5■■□□□ 1.19
VPS8Q8N3P4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS8Q8N3P4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 AC073869.2-201ENST00000417338 1026 ntBASIC22.49■■□□□ 1.19
VPS8Q8N3P4 PPP1R2P4-201ENST00000424051 595 ntBASIC22.49■■□□□ 1.19
VPS8Q8N3P4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 AC079328.1-201ENST00000560358 952 ntBASIC22.49■■□□□ 1.19
VPS8Q8N3P4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 AC009560.1-201ENST00000620208 434 ntBASIC22.49■■□□□ 1.19
VPS8Q8N3P4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS8Q8N3P4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 MIR4522-201ENST00000584932 87 ntBASIC22.48■■□□□ 1.19
VPS8Q8N3P4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS8Q8N3P4 BAP1-211ENST00000615113 489 ntBASIC22.48■■□□□ 1.19
VPS8Q8N3P4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 TCAM1P-207ENST00000485295 1537 ntBASIC22.47■■□□□ 1.19
VPS8Q8N3P4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 RN7SL455P-201ENST00000580629 282 ntBASIC22.47■■□□□ 1.19
VPS8Q8N3P4 AC007326.1-201ENST00000604539 458 ntBASIC22.47■■□□□ 1.19
VPS8Q8N3P4 AC005632.3-201ENST00000605544 308 ntBASIC22.47■■□□□ 1.19
VPS8Q8N3P4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms