Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CNGA4Q8IV77 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CNGA4Q8IV77 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CNGA4Q8IV77 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16■□□□□ 0.15
CNGA4Q8IV77 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CNGA4Q8IV77 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNGA4Q8IV77 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AC004890.2-204ENST00000481968 304 ntBASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AL390754.1-201ENST00000619088 582 ntBASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AC079781.4-201ENST00000641908 219 ntBASIC15.99■□□□□ 0.15
CNGA4Q8IV77 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.99■□□□□ 0.15
CNGA4Q8IV77 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AC072061.1-201ENST00000569710 2234 ntBASIC15.99■□□□□ 0.15
CNGA4Q8IV77 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 AL031595.1-201ENST00000623969 4709 ntBASIC15.99■□□□□ 0.15
CNGA4Q8IV77 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.99■□□□□ 0.15
CNGA4Q8IV77 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 SOCS2P1-201ENST00000417727 557 ntBASIC15.98■□□□□ 0.15
CNGA4Q8IV77 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 FO681548.1-201ENST00000455617 1132 ntBASIC15.98■□□□□ 0.15
CNGA4Q8IV77 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 AC104596.2-201ENST00000512793 793 ntBASIC15.98■□□□□ 0.15
CNGA4Q8IV77 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 AC004466.1-201ENST00000599515 1080 ntBASIC15.98■□□□□ 0.15
CNGA4Q8IV77 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.98■□□□□ 0.15
CNGA4Q8IV77 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.98■□□□□ 0.15
CNGA4Q8IV77 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.98■□□□□ 0.15
CNGA4Q8IV77 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.98■□□□□ 0.15
CNGA4Q8IV77 AC093028.1-201ENST00000622998 982 ntBASIC15.98■□□□□ 0.15
CNGA4Q8IV77 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CNGA4Q8IV77 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms