Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 AL033527.5-201ENST00000641382 801 ntBASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATPAF1Q5TC12 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ATPAF1Q5TC12 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ATPAF1Q5TC12 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ATPAF1Q5TC12 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ATPAF1Q5TC12 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
ATPAF1Q5TC12 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.83□□□□□ -0.35
ATPAF1Q5TC12 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ATPAF1Q5TC12 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
ATPAF1Q5TC12 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.83□□□□□ -0.35
ATPAF1Q5TC12 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ATPAF1Q5TC12 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 AP006294.1-201ENST00000415407 339 ntBASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 BX539320.1-201ENST00000623759 877 ntBASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATPAF1Q5TC12 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms