Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RAB1AP62820 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 AC009093.2-202ENST00000620513 2079 ntBASIC12.98□□□□□ -0.33
RAB1AP62820 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB1AP62820 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB1AP62820 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RAB1AP62820 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 MRPL37P1-201ENST00000592451 1337 ntBASIC12.98□□□□□ -0.33
RAB1AP62820 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB1AP62820 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.98□□□□□ -0.33
RAB1AP62820 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB1AP62820 FAM21FP-201ENST00000426241 1131 ntBASIC12.98□□□□□ -0.33
RAB1AP62820 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB1AP62820 CNN2P10-201ENST00000443067 918 ntBASIC12.98□□□□□ -0.33
RAB1AP62820 GCOM2-201ENST00000509133 1104 ntBASIC12.98□□□□□ -0.33
RAB1AP62820 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.98□□□□□ -0.33
RAB1AP62820 PPY2P-201ENST00000582808 702 ntBASIC12.98□□□□□ -0.33
RAB1AP62820 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.98□□□□□ -0.33
RAB1AP62820 AL359881.2-201ENST00000602973 570 ntBASIC12.98□□□□□ -0.33
RAB1AP62820 AC002472.3-201ENST00000640124 621 ntBASIC12.98□□□□□ -0.33
RAB1AP62820 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RAB1AP62820 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RAB1AP62820 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
RAB1AP62820 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RAB1AP62820 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB1AP62820 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB1AP62820 AC010327.5-201ENST00000586923 3061 ntBASIC12.98□□□□□ -0.33
RAB1AP62820 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 PTENP1-202ENST00000532280 3996 ntBASIC12.98□□□□□ -0.33
RAB1AP62820 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB1AP62820 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RAB1AP62820 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB1AP62820 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB1AP62820 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RAB1AP62820 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB1AP62820 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB1AP62820 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAB1AP62820 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB1AP62820 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB1AP62820 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB1AP62820 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB1AP62820 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB1AP62820 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB1AP62820 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB1AP62820 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB1AP62820 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB1AP62820 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB1AP62820 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RAB1AP62820 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RAB1AP62820 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB1AP62820 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB1AP62820 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RAB1AP62820 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.97□□□□□ -0.33
RAB1AP62820 AL136309.1-201ENST00000403917 691 ntBASIC12.97□□□□□ -0.33
RAB1AP62820 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms