Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.17■□□□□ 0.18
GPC3P51654 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.17■□□□□ 0.18
GPC3P51654 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 AC078875.1-201ENST00000431907 724 ntBASIC16.17■□□□□ 0.18
GPC3P51654 AL596276.2-201ENST00000447525 331 ntBASIC16.17■□□□□ 0.18
GPC3P51654 AC012618.1-201ENST00000461223 412 ntBASIC16.17■□□□□ 0.18
GPC3P51654 RN7SL769P-201ENST00000469386 295 ntBASIC16.17■□□□□ 0.18
GPC3P51654 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.17■□□□□ 0.18
GPC3P51654 NUP210P1-202ENST00000504322 710 ntBASIC16.17■□□□□ 0.18
GPC3P51654 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.17■□□□□ 0.18
GPC3P51654 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.17■□□□□ 0.18
GPC3P51654 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.17■□□□□ 0.18
GPC3P51654 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.17■□□□□ 0.18
GPC3P51654 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.17■□□□□ 0.18
GPC3P51654 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.17■□□□□ 0.18
GPC3P51654 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 TMBIM7P-202ENST00000641474 1516 ntBASIC16.17■□□□□ 0.18
GPC3P51654 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GPC3P51654 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
GPC3P51654 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.17■□□□□ 0.18
GPC3P51654 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.17■□□□□ 0.18
GPC3P51654 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
GPC3P51654 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.16■□□□□ 0.18
GPC3P51654 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.16■□□□□ 0.18
GPC3P51654 KRT8P28-201ENST00000433288 1390 ntBASIC16.16■□□□□ 0.18
GPC3P51654 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 AC005912.2-201ENST00000619492 2400 ntBASIC16.16■□□□□ 0.18
GPC3P51654 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.16■□□□□ 0.18
GPC3P51654 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.16■□□□□ 0.18
GPC3P51654 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.16■□□□□ 0.18
GPC3P51654 RN7SL720P-201ENST00000488178 304 ntBASIC16.16■□□□□ 0.18
GPC3P51654 RBM8B-201ENST00000555532 525 ntBASIC16.16■□□□□ 0.18
GPC3P51654 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
GPC3P51654 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GPC3P51654 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.16■□□□□ 0.18
GPC3P51654 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.16■□□□□ 0.18
GPC3P51654 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.16■□□□□ 0.18
GPC3P51654 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GPC3P51654 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC3P51654 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GPC3P51654 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC3P51654 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.15■□□□□ 0.18
GPC3P51654 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC3P51654 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.15■□□□□ 0.18
GPC3P51654 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC3P51654 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.15■□□□□ 0.18
GPC3P51654 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GPC3P51654 AL354702.1-201ENST00000442006 1960 ntBASIC16.15■□□□□ 0.18
GPC3P51654 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC3P51654 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC3P51654 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
GPC3P51654 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC3P51654 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.15■□□□□ 0.18
GPC3P51654 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC3P51654 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC3P51654 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.15■□□□□ 0.18
GPC3P51654 ISCA2P1-201ENST00000425548 448 ntBASIC16.15■□□□□ 0.18
GPC3P51654 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC3P51654 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.15■□□□□ 0.18
GPC3P51654 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.15■□□□□ 0.18
GPC3P51654 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.15■□□□□ 0.18
GPC3P51654 AC103988.2-201ENST00000561804 725 ntBASIC16.15■□□□□ 0.18
GPC3P51654 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.15■□□□□ 0.18
GPC3P51654 AF254983.2-201ENST00000612331 135 ntBASIC16.15■□□□□ 0.18
GPC3P51654 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GPC3P51654 AC133540.1-201ENST00000620845 1019 ntBASIC16.15■□□□□ 0.18
GPC3P51654 NAP1L6-202ENST00000641404 1222 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms