Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB28P51157 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RAB28P51157 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB28P51157 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.16□□□□□ -0.14
RAB28P51157 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB28P51157 RPL18P13-201ENST00000478088 569 ntBASIC14.16□□□□□ -0.14
RAB28P51157 AC106794.1-201ENST00000506935 792 ntBASIC14.16□□□□□ -0.14
RAB28P51157 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB28P51157 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.16□□□□□ -0.14
RAB28P51157 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB28P51157 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB28P51157 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB28P51157 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB28P51157 RN7SL163P-201ENST00000583100 276 ntBASIC14.16□□□□□ -0.14
RAB28P51157 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB28P51157 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
RAB28P51157 AC004923.1-202ENST00000642106 209 ntBASIC14.16□□□□□ -0.14
RAB28P51157 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB28P51157 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RAB28P51157 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RAB28P51157 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RAB28P51157 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB28P51157 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB28P51157 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
RAB28P51157 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB28P51157 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.16□□□□□ -0.14
RAB28P51157 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB28P51157 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB28P51157 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB28P51157 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
RAB28P51157 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB28P51157 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
RAB28P51157 AC097359.2-201ENST00000604992 2389 ntBASIC14.15□□□□□ -0.14
RAB28P51157 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
RAB28P51157 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 AC144522.1-201ENST00000625111 1658 ntBASIC14.15□□□□□ -0.14
RAB28P51157 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB28P51157 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB28P51157 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB28P51157 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RAB28P51157 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB28P51157 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB28P51157 AC006122.1-201ENST00000493323 440 ntBASIC14.15□□□□□ -0.14
RAB28P51157 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB28P51157 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB28P51157 AP001258.2-201ENST00000529891 490 ntBASIC14.15□□□□□ -0.14
RAB28P51157 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB28P51157 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB28P51157 AL160314.3-201ENST00000556041 767 ntBASIC14.15□□□□□ -0.14
RAB28P51157 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB28P51157 AC008805.1-201ENST00000590892 364 ntBASIC14.15□□□□□ -0.14
RAB28P51157 AL136295.7-201ENST00000619226 1200 ntBASIC14.15□□□□□ -0.14
RAB28P51157 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.15□□□□□ -0.14
RAB28P51157 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAB28P51157 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB28P51157 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB28P51157 MBLAC2-202ENST00000514906 1936 ntBASIC14.15□□□□□ -0.14
RAB28P51157 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB28P51157 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB28P51157 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RAB28P51157 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB28P51157 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB28P51157 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB28P51157 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB28P51157 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms