Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HOXC8P31273 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HOXC8P31273 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HOXC8P31273 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HOXC8P31273 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
HOXC8P31273 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.71■□□□□ 0.1
HOXC8P31273 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.71■□□□□ 0.1
HOXC8P31273 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HOXC8P31273 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HOXC8P31273 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.7■□□□□ 0.1
HOXC8P31273 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.7■□□□□ 0.1
HOXC8P31273 AC026410.1-201ENST00000507366 1101 ntBASIC15.7■□□□□ 0.1
HOXC8P31273 AC084752.1-201ENST00000509766 622 ntBASIC15.7■□□□□ 0.1
HOXC8P31273 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.7■□□□□ 0.1
HOXC8P31273 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.7■□□□□ 0.1
HOXC8P31273 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.7■□□□□ 0.1
HOXC8P31273 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.7■□□□□ 0.1
HOXC8P31273 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.7■□□□□ 0.1
HOXC8P31273 LINC00244-201ENST00000625073 613 ntBASIC15.7■□□□□ 0.1
HOXC8P31273 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HOXC8P31273 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.7■□□□□ 0.1
HOXC8P31273 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HOXC8P31273 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
HOXC8P31273 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
HOXC8P31273 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HOXC8P31273 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.7■□□□□ 0.1
HOXC8P31273 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXC8P31273 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HOXC8P31273 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXC8P31273 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HOXC8P31273 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HOXC8P31273 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HOXC8P31273 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HOXC8P31273 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
HOXC8P31273 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXC8P31273 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 AC011498.7-201ENST00000624986 2027 ntBASIC15.69■□□□□ 0.1
HOXC8P31273 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HOXC8P31273 AC103592.1-201ENST00000394513 664 ntBASIC15.69■□□□□ 0.1
HOXC8P31273 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HOXC8P31273 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXC8P31273 AL157792.1-201ENST00000488281 530 ntBASIC15.69■□□□□ 0.1
HOXC8P31273 AL512310.5-201ENST00000551999 515 ntBASIC15.69■□□□□ 0.1
HOXC8P31273 AC023824.1-201ENST00000562945 2975 ntBASIC15.69■□□□□ 0.1
HOXC8P31273 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXC8P31273 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.69■□□□□ 0.1
HOXC8P31273 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.69■□□□□ 0.1
HOXC8P31273 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXC8P31273 LINC00431-202ENST00000636375 159 ntBASIC15.69■□□□□ 0.1
HOXC8P31273 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms