Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM21P19474 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM21P19474 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRIM21P19474 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM21P19474 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 AC005229.1-201ENST00000392885 409 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 BOLA2P3-201ENST00000404566 256 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 C2orf27AP3-201ENST00000434123 579 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 AC093433.1-201ENST00000458048 571 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 AC022616.1-201ENST00000518688 554 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 AC132938.2-201ENST00000579188 680 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 CLUHP6-201ENST00000580789 941 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRIM21P19474 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.28■□□□□ 0.2
TRIM21P19474 AL354718.3-201ENST00000616414 581 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 CR382287.1-201ENST00000623954 586 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 AL591163.1-201ENST00000641757 987 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM21P19474 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRIM21P19474 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM21P19474 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.28■□□□□ 0.2
TRIM21P19474 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM21P19474 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM21P19474 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM21P19474 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM21P19474 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.27■□□□□ 0.2
TRIM21P19474 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM21P19474 ACTBP8-201ENST00000403258 1108 ntBASIC16.27■□□□□ 0.2
TRIM21P19474 KLF2P2-201ENST00000416807 1039 ntBASIC16.27■□□□□ 0.2
TRIM21P19474 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRIM21P19474 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM21P19474 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM21P19474 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM21P19474 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TRIM21P19474 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM21P19474 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM21P19474 AC239800.4-201ENST00000603712 296 ntBASIC16.27■□□□□ 0.2
TRIM21P19474 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRIM21P19474 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM21P19474 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM21P19474 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TRIM21P19474 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM21P19474 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM21P19474 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRIM21P19474 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM21P19474 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM21P19474 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRIM21P19474 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRIM21P19474 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM21P19474 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM21P19474 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM21P19474 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms