Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.05■□□□□ 0
HMGA1P17096 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMGA1P17096 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.05■□□□□ 0
HMGA1P17096 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
HMGA1P17096 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGA1P17096 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.05■□□□□ 0
HMGA1P17096 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.05■□□□□ 0
HMGA1P17096 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMGA1P17096 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMGA1P17096 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
HMGA1P17096 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.05■□□□□ -0
HMGA1P17096 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGA1P17096 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.05■□□□□ -0
HMGA1P17096 AP000356.3-201ENST00000382243 753 ntBASIC15.05■□□□□ -0
HMGA1P17096 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
HMGA1P17096 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGA1P17096 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGA1P17096 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.05■□□□□ -0
HMGA1P17096 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HMGA1P17096 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.05■□□□□ -0
HMGA1P17096 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
HMGA1P17096 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.05■□□□□ -0
HMGA1P17096 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.05■□□□□ -0
HMGA1P17096 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HMGA1P17096 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.05■□□□□ -0
HMGA1P17096 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGA1P17096 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.05■□□□□ -0
HMGA1P17096 AC092978.1-202ENST00000637590 1327 ntBASIC15.05■□□□□ -0
HMGA1P17096 MARK2P16-201ENST00000605714 1723 ntBASIC15.05■□□□□ -0
HMGA1P17096 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.05■□□□□ -0
HMGA1P17096 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
HMGA1P17096 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HMGA1P17096 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGA1P17096 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.05■□□□□ -0
HMGA1P17096 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGA1P17096 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
HMGA1P17096 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 TNRC18P2-201ENST00000417666 2714 ntBASIC15.04■□□□□ -0
HMGA1P17096 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.04■□□□□ -0
HMGA1P17096 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.04■□□□□ -0
HMGA1P17096 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 AL627422.1-201ENST00000434104 580 ntBASIC15.04■□□□□ -0
HMGA1P17096 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 TPT1P11-201ENST00000458482 498 ntBASIC15.04■□□□□ -0
HMGA1P17096 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 AC008267.1-201ENST00000474858 1069 ntBASIC15.04■□□□□ -0
HMGA1P17096 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 NPM1P43-201ENST00000558669 786 ntBASIC15.04■□□□□ -0
HMGA1P17096 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.04■□□□□ -0
HMGA1P17096 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.04■□□□□ -0
HMGA1P17096 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 DBET-201ENST00000630918 3363 ntBASIC15.04■□□□□ -0
HMGA1P17096 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.04■□□□□ -0
HMGA1P17096 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.04■□□□□ -0
HMGA1P17096 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 AC011498.7-201ENST00000624986 2027 ntBASIC15.04■□□□□ -0
HMGA1P17096 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGA1P17096 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HMGA1P17096 AC113367.3-201ENST00000508316 1912 ntBASIC15.04■□□□□ -0
HMGA1P17096 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.03■□□□□ -0
HMGA1P17096 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.03■□□□□ -0
HMGA1P17096 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.03■□□□□ -0
HMGA1P17096 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.03■□□□□ -0
HMGA1P17096 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms