Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A1P11836 CICP20-201ENST00000443330 2801 ntBASIC18.9■□□□□ 0.62
MS4A1P11836 CICP8-201ENST00000455800 2813 ntBASIC18.9■□□□□ 0.62
MS4A1P11836 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A1P11836 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A1P11836 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A1P11836 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MS4A1P11836 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
MS4A1P11836 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC18.89■□□□□ 0.62
MS4A1P11836 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
MS4A1P11836 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
MS4A1P11836 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
MS4A1P11836 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
MS4A1P11836 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A1P11836 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC18.89■□□□□ 0.61
MS4A1P11836 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A1P11836 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MS4A1P11836 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MS4A1P11836 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 AC139712.1-201ENST00000378256 1875 ntBASIC18.89■□□□□ 0.61
MS4A1P11836 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MS4A1P11836 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.89■□□□□ 0.61
MS4A1P11836 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
MS4A1P11836 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
MS4A1P11836 AC092933.1-201ENST00000393644 945 ntBASIC18.89■□□□□ 0.61
MS4A1P11836 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.89■□□□□ 0.61
MS4A1P11836 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.89■□□□□ 0.61
MS4A1P11836 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.89■□□□□ 0.61
MS4A1P11836 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.89■□□□□ 0.61
MS4A1P11836 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A1P11836 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.89■□□□□ 0.61
MS4A1P11836 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.89■□□□□ 0.61
MS4A1P11836 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.89■□□□□ 0.61
MS4A1P11836 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
MS4A1P11836 AC233724.13-201ENST00000598383 410 ntBASIC18.89■□□□□ 0.61
MS4A1P11836 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.89■□□□□ 0.61
MS4A1P11836 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A1P11836 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A1P11836 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A1P11836 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MS4A1P11836 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.89■□□□□ 0.61
MS4A1P11836 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A1P11836 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.89■□□□□ 0.61
MS4A1P11836 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.88■□□□□ 0.61
MS4A1P11836 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
MS4A1P11836 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
MS4A1P11836 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC18.88■□□□□ 0.61
MS4A1P11836 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC18.88■□□□□ 0.61
MS4A1P11836 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC18.88■□□□□ 0.61
MS4A1P11836 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.88■□□□□ 0.61
MS4A1P11836 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MS4A1P11836 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
MS4A1P11836 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.88■□□□□ 0.61
MS4A1P11836 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.88■□□□□ 0.61
MS4A1P11836 PUDPP3-201ENST00000445368 636 ntBASIC18.88■□□□□ 0.61
MS4A1P11836 RN7SL692P-201ENST00000464677 288 ntBASIC18.88■□□□□ 0.61
MS4A1P11836 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MS4A1P11836 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.88■□□□□ 0.61
MS4A1P11836 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.88■□□□□ 0.61
MS4A1P11836 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 AC106820.3-201ENST00000561653 397 ntBASIC18.88■□□□□ 0.61
MS4A1P11836 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.88■□□□□ 0.61
MS4A1P11836 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.88■□□□□ 0.61
MS4A1P11836 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.88■□□□□ 0.61
MS4A1P11836 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 TCAM1P-207ENST00000485295 1537 ntBASIC18.88■□□□□ 0.61
MS4A1P11836 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MS4A1P11836 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A1P11836 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MS4A1P11836 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MS4A1P11836 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms