Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 MIR600HG-201ENST00000449175 5984 ntBASIC14.86□□□□□ -0.03
HLA-DQB2P05538 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 CICP16-201ENST00000502609 2813 ntBASIC14.86□□□□□ -0.03
HLA-DQB2P05538 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 Z93015.1-201ENST00000451718 390 ntBASIC14.86□□□□□ -0.03
HLA-DQB2P05538 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 FAM86HP-204ENST00000513466 959 ntBASIC14.86□□□□□ -0.03
HLA-DQB2P05538 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 AL583810.1-201ENST00000553344 1045 ntBASIC14.86□□□□□ -0.03
HLA-DQB2P05538 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 RN7SL560P-201ENST00000577943 264 ntBASIC14.86□□□□□ -0.03
HLA-DQB2P05538 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 AL162426.1-201ENST00000624141 743 ntBASIC14.86□□□□□ -0.03
HLA-DQB2P05538 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 AC020910.6-201ENST00000623084 1459 ntBASIC14.86□□□□□ -0.03
HLA-DQB2P05538 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 HSPA8P5-201ENST00000456928 2069 ntBASIC14.86□□□□□ -0.03
HLA-DQB2P05538 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 AL008718.2-201ENST00000609206 1313 ntBASIC14.86□□□□□ -0.03
HLA-DQB2P05538 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 AC100827.2-201ENST00000563214 1194 ntBASIC14.85□□□□□ -0.03
HLA-DQB2P05538 AC005730.2-201ENST00000564549 1184 ntBASIC14.85□□□□□ -0.03
HLA-DQB2P05538 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.85□□□□□ -0.03
HLA-DQB2P05538 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 Z98259.2-201ENST00000641583 609 ntBASIC14.85□□□□□ -0.03
HLA-DQB2P05538 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 AC016397.2-201ENST00000624848 1985 ntBASIC14.85□□□□□ -0.03
HLA-DQB2P05538 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms