Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
XRCC2O43543 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
XRCC2O43543 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 CU639417.3-201ENST00000624240 1404 ntBASIC12.83□□□□□ -0.36
XRCC2O43543 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.83□□□□□ -0.36
XRCC2O43543 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
XRCC2O43543 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
XRCC2O43543 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
XRCC2O43543 AL512384.1-201ENST00000406683 331 ntBASIC12.83□□□□□ -0.36
XRCC2O43543 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.83□□□□□ -0.36
XRCC2O43543 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.83□□□□□ -0.36
XRCC2O43543 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.83□□□□□ -0.36
XRCC2O43543 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.83□□□□□ -0.36
XRCC2O43543 RNA5SP486-201ENST00000515961 83 ntBASIC12.83□□□□□ -0.36
XRCC2O43543 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
XRCC2O43543 SLC25A47P1-201ENST00000531577 414 ntBASIC12.83□□□□□ -0.36
XRCC2O43543 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
XRCC2O43543 GNRHR2-203ENST00000581100 1187 ntBASIC12.83□□□□□ -0.36
XRCC2O43543 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.83□□□□□ -0.36
XRCC2O43543 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.83□□□□□ -0.36
XRCC2O43543 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.83□□□□□ -0.36
XRCC2O43543 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.83□□□□□ -0.36
XRCC2O43543 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
XRCC2O43543 HSPA7-201ENST00000445535 1927 ntBASIC12.83□□□□□ -0.36
XRCC2O43543 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 AC015688.4-201ENST00000580780 1647 ntBASIC12.83□□□□□ -0.36
XRCC2O43543 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
XRCC2O43543 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
XRCC2O43543 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
XRCC2O43543 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.83□□□□□ -0.36
XRCC2O43543 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.82□□□□□ -0.36
XRCC2O43543 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 AL928921.2-201ENST00000641325 2442 ntBASIC12.82□□□□□ -0.36
XRCC2O43543 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.82□□□□□ -0.36
XRCC2O43543 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.82□□□□□ -0.36
XRCC2O43543 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
XRCC2O43543 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
XRCC2O43543 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.82□□□□□ -0.36
XRCC2O43543 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 RN7SKP175-201ENST00000408472 289 ntBASIC12.82□□□□□ -0.36
XRCC2O43543 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.82□□□□□ -0.36
XRCC2O43543 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.82□□□□□ -0.36
XRCC2O43543 INE1-201ENST00000456273 945 ntBASIC12.82□□□□□ -0.36
XRCC2O43543 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 USP32P1-208ENST00000506594 1164 ntBASIC12.82□□□□□ -0.36
XRCC2O43543 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.82□□□□□ -0.36
XRCC2O43543 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms