Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 NCLP1-201ENST00000445357 1963 ntBASIC15.64■□□□□ 0.09
RCCD1A6NED2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 SPTLC1P1-201ENST00000447199 261 ntBASIC15.64■□□□□ 0.09
RCCD1A6NED2 UGT1A2P-201ENST00000454886 866 ntBASIC15.64■□□□□ 0.09
RCCD1A6NED2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 CHCHD2P3-201ENST00000603038 451 ntBASIC15.64■□□□□ 0.09
RCCD1A6NED2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 AC005014.1-201ENST00000432006 2976 ntBASIC15.63■□□□□ 0.09
RCCD1A6NED2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 AGAP12P-201ENST00000585227 2359 ntBASIC15.63■□□□□ 0.09
RCCD1A6NED2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 Z97985.1-201ENST00000332270 946 ntBASIC15.63■□□□□ 0.09
RCCD1A6NED2 ACKR1-201ENST00000368121 1240 ntBASIC15.63■□□□□ 0.09
RCCD1A6NED2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.63■□□□□ 0.09
RCCD1A6NED2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RCCD1A6NED2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RCCD1A6NED2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms