Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 KRT17P5-201ENST00000332088 839 ntBASIC12.78□□□□□ -0.36
MBD3L3A6NE82 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 RN7SL181P-201ENST00000462921 277 ntBASIC12.78□□□□□ -0.36
MBD3L3A6NE82 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 AC022447.6-201ENST00000515522 438 ntBASIC12.78□□□□□ -0.36
MBD3L3A6NE82 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 AC138894.2-201ENST00000602838 371 ntBASIC12.78□□□□□ -0.36
MBD3L3A6NE82 AC104506.1-201ENST00000609247 429 ntBASIC12.78□□□□□ -0.36
MBD3L3A6NE82 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 AC064801.2-201ENST00000625052 1303 ntBASIC12.78□□□□□ -0.36
MBD3L3A6NE82 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 CICP14-201ENST00000629111 2732 ntBASIC12.78□□□□□ -0.36
MBD3L3A6NE82 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MBD3L3A6NE82 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MBD3L3A6NE82 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 FTH1P22-201ENST00000456305 520 ntBASIC12.77□□□□□ -0.37
MBD3L3A6NE82 CHCHD2P9-201ENST00000461726 456 ntBASIC12.77□□□□□ -0.37
MBD3L3A6NE82 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 AC008267.1-201ENST00000474858 1069 ntBASIC12.77□□□□□ -0.37
MBD3L3A6NE82 NDUFS6P1-201ENST00000485187 316 ntBASIC12.77□□□□□ -0.37
MBD3L3A6NE82 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 MIR3147-201ENST00000577811 66 ntBASIC12.77□□□□□ -0.37
MBD3L3A6NE82 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms