Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 AC090616.6-203ENST00000579186 1945 ntBASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 E2F3P2-201ENST00000447755 1422 ntBASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 TMBIM7P-203ENST00000641617 1718 ntBASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 AL109954.1-202ENST00000564051 2148 ntBASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 RN7SKP230-201ENST00000365642 335 ntBASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 AC134698.3-201ENST00000523880 214 ntBASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 AC090857.1-201ENST00000527400 390 ntBASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 AC128714.1-201ENST00000637035 887 ntBASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSX2IPQ9Y2D8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 INE2-201ENST00000630399 1874 ntBASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 AL596276.2-201ENST00000447525 331 ntBASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 AL035414.1-201ENST00000451327 857 ntBASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 MIR4783-201ENST00000580343 82 ntBASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.84■□□□□ 0.13
SSX2IPQ9Y2D8 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms