Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC026954.1-201ENST00000429771 1293 ntBASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 AL355994.2-201ENST00000447882 704 ntBASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 RNA5SP412-201ENST00000516234 123 ntBASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 FGD5P1-202ENST00000614866 2498 ntBASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 AL136309.1-201ENST00000403917 691 ntBASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 AL391280.1-201ENST00000506969 1062 ntBASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 SNX29P1-201ENST00000548357 1007 ntBASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 DUX4L45-201ENST00000566406 1057 ntBASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 CICP24-201ENST00000605464 2705 ntBASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.24□□□□□ -0.29
PARPBPQ9NWS1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 ANKRD19P-201ENST00000338192 862 ntBASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 RN7SKP175-201ENST00000408472 289 ntBASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 AC004945.1-201ENST00000416738 983 ntBASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 ALG3P1-201ENST00000508806 1114 ntBASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PARPBPQ9NWS1 AC010328.2-201ENST00000597698 1111 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms