Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.04□□□□□ -0.16
NMD3Q96D46 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.04□□□□□ -0.16
NMD3Q96D46 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.04□□□□□ -0.16
NMD3Q96D46 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.04□□□□□ -0.16
NMD3Q96D46 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.04□□□□□ -0.16
NMD3Q96D46 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
NMD3Q96D46 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NMD3Q96D46 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
NMD3Q96D46 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 AP001972.5-201ENST00000624624 2338 ntBASIC14.04□□□□□ -0.16
NMD3Q96D46 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 AL607033.1-201ENST00000623900 1599 ntBASIC14.04□□□□□ -0.16
NMD3Q96D46 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.04□□□□□ -0.16
NMD3Q96D46 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.03□□□□□ -0.16
NMD3Q96D46 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 AC022497.1-201ENST00000624916 3691 ntBASIC14.03□□□□□ -0.16
NMD3Q96D46 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.03□□□□□ -0.16
NMD3Q96D46 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 CICP1-201ENST00000416803 2410 ntBASIC14.03□□□□□ -0.16
NMD3Q96D46 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
NMD3Q96D46 AC111170.3-201ENST00000624282 2464 ntBASIC14.03□□□□□ -0.16
NMD3Q96D46 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.03□□□□□ -0.16
NMD3Q96D46 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 TSEN15P1-201ENST00000423257 515 ntBASIC14.03□□□□□ -0.16
NMD3Q96D46 MTND6P24-201ENST00000440466 518 ntBASIC14.03□□□□□ -0.16
NMD3Q96D46 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.03□□□□□ -0.16
NMD3Q96D46 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.03□□□□□ -0.16
NMD3Q96D46 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.03□□□□□ -0.16
NMD3Q96D46 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.03□□□□□ -0.16
NMD3Q96D46 AC015911.4-201ENST00000588022 1070 ntBASIC14.03□□□□□ -0.16
NMD3Q96D46 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.03□□□□□ -0.16
NMD3Q96D46 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.03□□□□□ -0.16
NMD3Q96D46 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.03□□□□□ -0.16
NMD3Q96D46 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NMD3Q96D46 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NMD3Q96D46 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NMD3Q96D46 TRIM80P-201ENST00000455685 2848 ntBASIC14.03□□□□□ -0.16
NMD3Q96D46 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC14.03□□□□□ -0.16
NMD3Q96D46 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NMD3Q96D46 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.02□□□□□ -0.16
NMD3Q96D46 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
NMD3Q96D46 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.02□□□□□ -0.16
NMD3Q96D46 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NMD3Q96D46 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.02□□□□□ -0.16
NMD3Q96D46 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NMD3Q96D46 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NMD3Q96D46 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NMD3Q96D46 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NMD3Q96D46 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NMD3Q96D46 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.02□□□□□ -0.16
NMD3Q96D46 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.02□□□□□ -0.16
NMD3Q96D46 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.02□□□□□ -0.16
NMD3Q96D46 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.02□□□□□ -0.16
NMD3Q96D46 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NMD3Q96D46 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NMD3Q96D46 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NMD3Q96D46 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NMD3Q96D46 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NMD3Q96D46 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.02□□□□□ -0.17
NMD3Q96D46 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NMD3Q96D46 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.02□□□□□ -0.17
NMD3Q96D46 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NMD3Q96D46 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.02□□□□□ -0.17
NMD3Q96D46 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.02□□□□□ -0.17
NMD3Q96D46 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.02□□□□□ -0.17
NMD3Q96D46 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.02□□□□□ -0.17
NMD3Q96D46 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NMD3Q96D46 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms