Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AL157813.1-201ENST00000612996 587 ntBASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 AC018629.1-201ENST00000623381 1736 ntBASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 AC064801.2-201ENST00000625052 1303 ntBASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ARHGEF39Q8N4T4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 RN7SL832P-201ENST00000607781 1756 ntBASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 RN7SL774P-201ENST00000577467 290 ntBASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 NDUFV2P1-201ENST00000596415 907 ntBASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 MIR600HG-201ENST00000449175 5984 ntBASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ARHGEF39Q8N4T4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 LINC02228-204ENST00000642115 2962 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC011498.7-201ENST00000624986 2027 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 RN7SKP214-201ENST00000364208 315 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 SPTLC1P5-201ENST00000450718 252 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 RCC2P8-201ENST00000502779 1035 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 PGAM1P5-201ENST00000548011 764 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC005586.2-201ENST00000563946 837 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC124068.2-201ENST00000569473 1109 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC012183.1-201ENST00000625197 499 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC100757.4-201ENST00000626934 759 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AHCYP4-201ENST00000419201 1315 ntBASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ARHGEF39Q8N4T4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms