Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TPT1P11-201ENST00000458482 498 ntBASIC14□□□□□ -0.17
SKP1P63208 RPL13AP20-201ENST00000459725 609 ntBASIC14□□□□□ -0.17
SKP1P63208 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14□□□□□ -0.17
SKP1P63208 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14□□□□□ -0.17
SKP1P63208 FAM86HP-204ENST00000513466 959 ntBASIC14□□□□□ -0.17
SKP1P63208 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14□□□□□ -0.17
SKP1P63208 AC009884.2-201ENST00000603110 324 ntBASIC14□□□□□ -0.17
SKP1P63208 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SKP1P63208 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SKP1P63208 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14□□□□□ -0.17
SKP1P63208 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SKP1P63208 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14□□□□□ -0.17
SKP1P63208 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SKP1P63208 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SKP1P63208 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.99□□□□□ -0.17
SKP1P63208 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.99□□□□□ -0.17
SKP1P63208 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.99□□□□□ -0.17
SKP1P63208 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.99□□□□□ -0.17
SKP1P63208 POM121L10P-201ENST00000436994 1285 ntBASIC13.99□□□□□ -0.17
SKP1P63208 AC012441.2-201ENST00000444843 739 ntBASIC13.99□□□□□ -0.17
SKP1P63208 HSPB1P2-201ENST00000448722 546 ntBASIC13.99□□□□□ -0.17
SKP1P63208 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.99□□□□□ -0.17
SKP1P63208 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 TUBB8P8-201ENST00000458717 1058 ntBASIC13.99□□□□□ -0.17
SKP1P63208 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SKP1P63208 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.99□□□□□ -0.17
SKP1P63208 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.99□□□□□ -0.17
SKP1P63208 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.99□□□□□ -0.17
SKP1P63208 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.99□□□□□ -0.17
SKP1P63208 AC100827.2-201ENST00000563214 1194 ntBASIC13.99□□□□□ -0.17
SKP1P63208 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.99□□□□□ -0.17
SKP1P63208 AC132192.2-201ENST00000596206 1147 ntBASIC13.99□□□□□ -0.17
SKP1P63208 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.99□□□□□ -0.17
SKP1P63208 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.99□□□□□ -0.17
SKP1P63208 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.99□□□□□ -0.17
SKP1P63208 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 AC139712.1-201ENST00000378256 1875 ntBASIC13.99□□□□□ -0.17
SKP1P63208 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.99□□□□□ -0.17
SKP1P63208 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SKP1P63208 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SKP1P63208 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SKP1P63208 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 INTS4P1-203ENST00000641008 3683 ntBASIC13.98□□□□□ -0.17
SKP1P63208 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.98□□□□□ -0.17
SKP1P63208 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.98□□□□□ -0.17
SKP1P63208 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms