Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH4P55283 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
CDH4P55283 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 AC016700.1-201ENST00000429424 312 ntBASIC14.98□□□□□ -0.01
CDH4P55283 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH4P55283 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH4P55283 AC009779.1-201ENST00000551138 283 ntBASIC14.98□□□□□ -0.01
CDH4P55283 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH4P55283 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CDH4P55283 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH4P55283 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH4P55283 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.97□□□□□ -0.01
CDH4P55283 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CDH4P55283 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.97□□□□□ -0.01
CDH4P55283 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH4P55283 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CDH4P55283 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.97□□□□□ -0.01
CDH4P55283 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH4P55283 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH4P55283 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH4P55283 AC022217.1-201ENST00000521069 738 ntBASIC14.97□□□□□ -0.01
CDH4P55283 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH4P55283 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH4P55283 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH4P55283 AC005586.2-201ENST00000563946 837 ntBASIC14.97□□□□□ -0.01
CDH4P55283 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.97□□□□□ -0.01
CDH4P55283 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 AC015802.1-201ENST00000588104 1449 ntBASIC14.97□□□□□ -0.01
CDH4P55283 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH4P55283 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CDH4P55283 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH4P55283 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDH4P55283 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH4P55283 AC007686.3-201ENST00000619017 3487 ntBASIC14.97□□□□□ -0.01
CDH4P55283 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH4P55283 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH4P55283 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH4P55283 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH4P55283 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH4P55283 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH4P55283 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH4P55283 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDH4P55283 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH4P55283 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDH4P55283 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH4P55283 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH4P55283 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH4P55283 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH4P55283 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH4P55283 AL008707.1-201ENST00000422498 534 ntBASIC14.96□□□□□ -0.01
CDH4P55283 FNTAP2-201ENST00000430308 634 ntBASIC14.96□□□□□ -0.01
CDH4P55283 AC078875.1-201ENST00000431907 724 ntBASIC14.96□□□□□ -0.01
CDH4P55283 AC011742.3-201ENST00000439053 820 ntBASIC14.96□□□□□ -0.01
CDH4P55283 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.96□□□□□ -0.01
CDH4P55283 ST13P19-201ENST00000442505 1124 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms